PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA05g01380
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family G2-like
Protein Properties Length: 250aa    MW: 27518.9 Da    PI: 5.3653
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA05g01380genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like36.21.4e-114673128
     G2-like  1 kprlrWtpeLHerFveaveqLGGsekAt 28
                kprlrWt +LHerFv+av+qLG +++ +
  CA05g01380 46 KPRLRWTADLHERFVDAVTQLGVIKNVV 73
                79*******************7665544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.9E-114381IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MYPRLIQSGQ EDEYIQHHGC DVNVVGIHHQ RVNGGDPCLV LTSDPKPRLR WTADLHERFV  60
DAVTQLGVIK NVVVELIKIV GVVELIKNGF VFVVELLKNV VVVVELLKNV VIAVELRKNV  120
VVVVELIKNV VVVVVXLCKN VVIVVELRKN VVVVDVELLK NVVVVVEFLK SDVVVVELIN  180
NVVVAVVELL KNVVVVVELL KNVVVVVELL KNDVVVVELI NNVVVELISN VVVVELIKNV  240
VVAVVVELI*
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCU0743073e-33CU074307.9 S.lycopersicum DNA sequence from clone LE_HBa-203L19 on chromosome 4, complete sequence.
GenBankHG9754433e-33HG975443.1 Solanum pennellii chromosome ch04, complete genome.
GenBankHG9755163e-33HG975516.1 Solanum lycopersicum chromosome ch04, complete genome.
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.13e-15G2-like family protein