PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA04g06080
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GeBP
Protein Properties Length: 185aa    MW: 21321.8 Da    PI: 10.6581
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA04g06080genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57338.53.3e-12288296
      DUF573  2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96
                 fq++w ++De +lL ++ +++a +gk+  ++ +++++++k++isfk +  q+ +Ki++LKk   k + +      +  +++ +++ f  s+k+W
  CA04g06080  2 SFQKVWIDKDEKTLLEAIESYRAIHGKE--SNNNKLFNIIKGKISFKPTIVQVRNKIKSLKKIKSKTRVR------TIEDTPAEKSFFCSSQKVW 88
                79************************76..5789**************************9843333333......3445778888888888888 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.2E-10389IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
KSFQKVWIDK DEKTLLEAIE SYRAIHGKES NNNKLFNIIK GKISFKPTIV QVRNKIKSLK  60
KIKSKTRVRT IEDTPAEKSF FCSSQKVWSV NRMCSTTAQS SKRKKVLKDT KISNIMMTLF  120
QGNEGDEVMQ IEMSRRKVGQ LIDSGLPTKW KDLINDQANQ YLIGLNNRKS KVELFLEMME  180
TEAR*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016561821.13e-99PREDICTED: uncharacterized protein LOC107860858 isoform X1
RefseqXP_016561822.13e-99PREDICTED: uncharacterized protein LOC107860858 isoform X2