PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA01g30290
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family G2-like
Protein Properties Length: 67aa    MW: 7642.11 Da    PI: 10.3259
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA01g30290genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like42.31.6e-1314382751
     G2-like 27 AtPktilelmkvkgLtlehvkSHLQ 51
                AtPk++lelm+vk+Ltl+hvkSHLQ
  CA01g30290 14 ATPKSVLELMDVKDLTLAHVKSHLQ 38
                9************************ PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.9E-121339IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-91439IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 67 aa     Download sequence    Send to blast
MNPYERAGSA TIGATPKSVL ELMDVKDLTL AHVKSHLQVK KFIKRGVIFF FFHLFEYRSW  60
VKIVCV*
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0109392e-31AP010939.1 Solanum lycopersicum DNA, chromosome 8, clone: C08HBa0175O15, complete sequence.
GenBankHG9754472e-31HG975447.1 Solanum pennellii chromosome ch08, complete genome.
GenBankHG9755202e-31HG975520.1 Solanum lycopersicum chromosome ch08, complete genome.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24682355
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.11e-12G2-like family protein