PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA01g12910
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 106aa    MW: 12029 Da    PI: 10.1248
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA01g12910genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP228.15.2e-092169254
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54
                +yk V+++k  g+W+Ae+r+       +   +++g+f ta+ Aa  ++    +++
  CA01g12910 21 RYKEVSQRK-PGKWLAEVRVlG-----TkDPIWIGTFNTAKVAAYPYDGTLIEMK 69
                7999***99.9*********66.....349**********999988876666655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.40E-162076No hitNo description
SuperFamilySSF541713.27E-112177IPR016177DNA-binding domain
PROSITE profilePS5103213.8012181IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.9E-162177IPR001471AP2/ERF domain
SMARTSM003803.4E-102184IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    Send to blast
MILIENYLER DLKLPQEKVK RYKEVSQRKP GKWLAEVRVL GTKDPIWIGT FNTAKVAAYP  60
YDGTLIEMKG ADAVTNILKT PPRYTSQMKI NYMNPPSSSI DNARI*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016550036.11e-38PREDICTED: ethylene-responsive transcription factor CRF5-like
TrEMBLA0A2G3AI514e-71A0A2G3AI51_CAPAN; Uncharacterized protein
STRINGXP_009783397.17e-24(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.21e-13cytokinin response factor 2