PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA01g12890
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 106aa    MW: 12012.8 Da    PI: 10.101
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA01g12890genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.27.4e-122170255
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +ykGVr++k  g WvAe+r+       +  +++g+f tae A   +++   +++g
  CA01g12890 21 RYKGVRQRK-PGNWVAEVRVsG----TKDPIWIGTFNTAEVATFPYDESLIEMKG 70
                8*******9.9*********33....35************998888888877776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.11E-182076No hitNo description
Gene3DG3DSA:3.30.730.105.5E-192177IPR001471AP2/ERF domain
SuperFamilySSF541712.81E-132177IPR016177DNA-binding domain
SMARTSM003805.5E-132184IPR001471AP2/ERF domain
PROSITE profilePS5103214.9612181IPR001471AP2/ERF domain
PfamPF008478.8E-72157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    Send to blast
MISIENYLER DLKLPQEKGK RYKGVRQRKP GNWVAEVRVS GTKDPIWIGT FNTAEVATFP  60
YDESLIEMKG ANVVTNILKT PPRYTSHMKI NYMNPPSSSI DNARI*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016550036.12e-39PREDICTED: ethylene-responsive transcription factor CRF5-like
TrEMBLA0A2G3AHX73e-72A0A2G3AHX7_CAPAN; Uncharacterized protein
STRINGXP_009783397.19e-26(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.13e-15ERF family protein