PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA01g12400
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 167aa    MW: 19024 Da    PI: 10.2241
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA01g12400genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.51.4e-1281131155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++y GVr++k +g+Wv  +r+       +  r+++g+f t eeA  a+++  ++++g
  CA01g12400  81 KKYEGVRQRK-QGKWVPDVRVlG-----TkDRIWIGTFSTVEEATLAYDKTINEMKG 131
                 59*******9.9****6666644.....34************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.02E-2081137No hitNo description
SuperFamilySSF541715.95E-1482138IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.4E-1982137IPR001471AP2/ERF domain
PROSITE profilePS5103215.05382139IPR001471AP2/ERF domain
SMARTSM003808.7E-1682147IPR001471AP2/ERF domain
PfamPF008474.0E-882131IPR001471AP2/ERF domain
PRINTSPR003674.7E-78394IPR001471AP2/ERF domain
PRINTSPR003674.7E-7105121IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MAFNEEHGEK EVFRNRSEVI AMEKLTDQIG GSSSILPRPG VVHFSDCDTM KLTTDEEGKA  60
KPPKKKSHRY MKRHLPQKKV KKYEGVRQRK QGKWVPDVRV LGTKDRIWIG TFSTVEEATL  120
AYDKTINEMK GAYAVTNILK PPPRYPSPME IIYMNPPSSS IYNARI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16367KKKSH
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016550036.11e-106PREDICTED: ethylene-responsive transcription factor CRF5-like
TrEMBLA0A2G3AI221e-120A0A2G3AI22_CAPAN; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61630.16e-17cytokinin response factor 6