PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA00g89360
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GeBP
Protein Properties Length: 86aa    MW: 9408.01 Da    PI: 10.6072
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA00g89360genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57332.13.2e-102514097
      DUF573 40 fvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97
                ++k++++++vsksql++Kir LKkKf + v+    g+ p f       +fe+s++iWg
  CA00g89360  2 IIKGKLHADVSKSQLSDKIRMLKKKFMTSVEY---GEVPGFL-----LVFEYSNQIWG 51
                689************************99988...8888776.....47888888887 PP

Sequence ? help Back to Top
Protein Sequence    Length: 86 aa     Download sequence    Send to blast
MIIKGKLHAD VSKSQLSDKI RMLKKKFMTS VEYGEVPGFL LVFEYSNQIW GAPSNNVVKE  60
NVSNSANGKA KKAVTVVVKK SAEHK*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016580681.19e-28PREDICTED: neurofilament heavy polypeptide-like
TrEMBLM1CH594e-25M1CH59_SOLTU; Uncharacterized protein
TrEMBLQ94IK23e-24Q94IK2_SOLTU; Storekeeper protein
STRINGPGSC0003DMT4000673631e-24(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA23692041