PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA00g84390
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Dof
Protein Properties Length: 338aa    MW: 37153.9 Da    PI: 6.593
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA00g84390genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof44.14.2e-1425503762
      zf-Dof 37 rryWtkGGalrnvPvGggrrknkkss 62
                 ryWtkGGalrnvP+Ggg+rknkk +
  CA00g84390 25 DRYWTKGGALRNVPIGGGCRKNKKIK 50
                6**********************975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027011.8E-82548IPR003851Zinc finger, Dof-type
ProDomPD0074788.0E-72647IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010052Biological Processguard cell differentiation
GO:0010118Biological Processstomatal movement
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:1902066Biological Processregulation of cell wall pectin metabolic process
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MFHLKSYIII RNSFTFSYLI ILCLDRYWTK GGALRNVPIG GGCRKNKKIK TCSSSSRDSK  60
DTTSGSSDIG GLKFFHGLSP AMDFQLGGLN FPRLNNTSTS TGGSIFNQFS TFGDISTTTT  120
NCATNIGSSS CFNLDPLGSC SGSLLGFNNF PFSSSILKQG TTAVQEMGSM GVHHGTMASS  180
IESLSSINQD LHWKLQQQRL AMLFGGENQK ENNIVSSSIP FDDQNQNQNQ NQNQIQIQKP  240
QPILFQNLEI SSSKQQEDHH HQEATTFGND NINSRKDVNI TIGSHGNNLA TEWFFDDSFG  300
VNPNSTNTIN ENEDQNGNNW NSTIQAWNNL NQYSTLP*
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754501e-110HG975450.1 Solanum pennellii chromosome ch11, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016549638.10.0PREDICTED: dof zinc finger protein DOF5.7-like
TrEMBLA0A1U8ER620.0A0A1U8ER62_CAPAN; dof zinc finger protein DOF5.7-like
TrEMBLA0A2G2XV950.0A0A2G2XV95_CAPAN; Uncharacterized protein
STRINGSolyc11g010940.1.11e-145(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52422234
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65590.12e-30Dof family protein