PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA00g69610
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 161aa    MW: 17935.4 Da    PI: 9.6588
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA00g69610genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2140.000144062123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++C + F ++  L  H++ H
  CA00g69610 40 FSCNYCRRKFYSSQALGGHQNAH 62
                89******************988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.35E-63767No hitNo description
PROSITE profilePS5015711.0534067IPR007087Zinc finger, C2H2
PROSITE patternPS0002804262IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MSYEPNTTLN LSLSRNEILL DQSSSSSSSS PLSPNEPRIF SCNYCRRKFY SSQALGGHQN  60
AHKLERTLAK KSREMTTSSL LPHSGWSNNN NNNNNNNNQT SGSLXHGGRG YGYGHGARFV  120
TNNDIMRYGR REMVINYGSM KNGESVHQED FGHLDLSLRL *
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016579616.12e-67PREDICTED: zinc finger protein 4-like isoform X1
RefseqXP_016579618.12e-67PREDICTED: zinc finger protein 2-like isoform X2
TrEMBLA0A2G2YZK11e-112A0A2G2YZK1_CAPAN; Zinc finger protein 7
STRINGSolyc07g006880.1.16e-64(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA88762128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.15e-24zinc finger protein 2