PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA00g36630
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 153aa    MW: 17399.1 Da    PI: 6.8078
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA00g36630genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.4e-203080255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr ++ +g+++AeIrd ++ng   r++lg++ taeeAa+a+++a+ +++g
  CA00g36630 30 RYRGVRKRP-WGKYAAEIRDINKNG--VRVWLGTYATAEEAARAYDKAAFEMRG 80
                8********.**********76676..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.56E-302989No hitNo description
SMARTSM003801.4E-363094IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-233090IPR016177DNA-binding domain
PfamPF008475.4E-143080IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-303089IPR001471AP2/ERF domain
PROSITE profilePS5103223.8943088IPR001471AP2/ERF domain
PRINTSPR003674.4E-113142IPR001471AP2/ERF domain
PRINTSPR003674.4E-115470IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
MFKSRNIQQN NMDEDNSNIK NKESGGEEKR YRGVRKRPWG KYAAEIRDIN KNGVRVWLGT  60
YATAEEAARA YDKAAFEMRG RFAVLNFPHE HPSFSSDHSS STSSSYSMAS SSTSHSSVHN  120
AHEVKEVIEF EYFDDKLLED LLGFESDKTK FT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-32121371114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016567930.11e-101PREDICTED: ethylene-responsive transcription factor ERF096-like
SwissprotQ9LTC56e-37ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A1U8G9W72e-99A0A1U8G9W7_CAPAN; Ethylene-responsive transcription factor
TrEMBLA0A2G2ZXM82e-99A0A2G2ZXM8_CAPAN; ethylene-responsive transcription factor ERF096-like
TrEMBLA0A2G3CV772e-99A0A2G3CV77_CAPCH; Ethylene-responsive transcription factor
STRINGXP_009621762.12e-48(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.14e-24ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]