PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA00g10990
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bZIP
Protein Properties Length: 382aa    MW: 43298.5 Da    PI: 8.438
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA00g10990genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.92.8e-1099127533
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                 k++rr+++NReAAr+sR RKka++++Le+
  CA00g10990  99 KVQRRLAQNREAARKSRMRKKAYVQQLET 127
                 99*************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.5E-595155IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.11797141IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.44E-799134No hitNo description
Gene3DG3DSA:1.20.5.1705.1E-899141No hitNo description
PfamPF001706.5E-799129IPR004827Basic-leucine zipper domain
PROSITE patternPS000360102117IPR004827Basic-leucine zipper domain
PfamPF141441.0E-28185258IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MTSPTTQFAP TRRMGIYEPF HQMSVWEDAF RGDIVPSVDA SMISQPNDRP DDKVKQTYIL  60
IILDNKIQIS TVSGYTSGEQ HIPSGSGDNQ APRRSISEKV QRRLAQNREA ARKSRMRKKA  120
YVQQLETSRL KLAQLELELE RARQQGLYML GSNSNMGILG TINPGIAAFE IEYSHWVEEQ  180
QKKNAELRSI LQSPVSDLEL QLLVENVLSH YFNLFRMKAD AAKADVFYLM SGMWRTSVER  240
FFLWIGGFKP SELINVVMPQ LEPLTDQQII KVCNLRHCCQ QAEDALTQGM DKLHQTLAQS  300
ILNMNTGAGN YASQMVSSME NLEALESFVN QADHLRQQTL QQMSIILTTR QAARGLLAFG  360
EYLQRLRALS SLWAARPREP T*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00247DAPTransfer from AT1G77920Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0142160.0BT014216.1 Lycopersicon esculentum clone 133394F, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016569358.10.0PREDICTED: transcription factor TGA7-like isoform X1
SwissprotQ93ZE21e-156TGA7_ARATH; Transcription factor TGA7
TrEMBLA0A2G2ZQC60.0A0A2G2ZQC6_CAPAN; Transcription factor TGA7
STRINGXP_009776929.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7802497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77920.11e-146bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]