PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv7_162100_nmor.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family TCP
Protein Properties Length: 195aa    MW: 21083.6 Da    PI: 7.6326
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv7_162100_nmor.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP114.71.2e-35471914113
                 TCP   4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa..seceaesssssasnsssg.... 88 
                         +   ++++hTkv+gR+RRvR++a+caar+F+L++eLG+ +d++tieWLl+ a+p+i+++tgt++ +a  + +++ ++sss      +    
  Bv7_162100_nmor.t1  47 RSNASKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRTDGQTIEWLLRHAEPSIIAATGTGTVPAvaE-FSSPAKSSSI-----Pakal 131
                         556789********************************************************88888321.1222222222.....13333 PP

                 TCP  89 ...................................kaaksaakskksqksaasalnlake 113
                                                             ++++ +++ ++q+++a +l +ake
  Bv7_162100_nmor.t1 132 plsvdsgcyfpspavlefgyrhipsftalllqpddGQQQQLQQEDEQQQQEAGVLGFAKE 191
                         466777778888888899998888888888888854444444667777777777888876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.0E-3050180IPR005333Transcription factor, TCP
PROSITE profilePS5136927.38151105IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MGSESTTTTT IFHNNNLPSS DPTFSLLSTT TATSSAAKST KLAVTRRSNA SKDRHTKVNG  60
RGRRVRMPAL CAARIFQLTR ELGHRTDGQT IEWLLRHAEP SIIAATGTGT VPAVAEFSSP  120
AKSSSIPAKA LPLSVDSGCY FPSPAVLEFG YRHIPSFTAL LLQPDDGQQQ QLQQEDEQQQ  180
QEAGVLGFAK EEIEN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010684094.11e-143PREDICTED: transcription factor PCF1
TrEMBLA0A0K9QRN61e-73A0A0K9QRN6_SPIOL; Uncharacterized protein
STRINGXP_010684094.11e-142(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08330.12e-28TCP family protein