PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv6_150370_whxc.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family TCP
Protein Properties Length: 210aa    MW: 22706.8 Da    PI: 4.8621
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv6_150370_whxc.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP77.43.9e-241852489
                 TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg...................k 89
                        ++a+caar+F+L++eLG+++d++ti+WLlqq+++ai++ tg+++ +as+  +++ss+s++s  +++                    
  Bv6_150370_whxc.t1  1 MPALCAARIFQLTRELGHKSDGETIQWLLQQSEQAIIATTGSGTMPASFLsSSVSSVSEQS-TTISsgisgisggfslinanlgrT 85
                        9**********************************************88844444444433.222234445555555555555540 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136919.986139IPR017887Transcription factor TCP subgroup
PfamPF036344.8E-201137IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MPALCAARIF QLTRELGHKS DGETIQWLLQ QSEQAIIATT GSGTMPASFL SSSVSSVSEQ  60
STTISSGISG ISGGFSLINA NLGRTHFQSG SWPYGSSSVH DSGFSIRDNL DSRNKLGVQG  120
LGMSNLNMGL VNFGQQQQQQ QQQGRDSLEL GLSQDNVGFG VFNYGTINQM YQQLRQNNNN  180
NNNREEVDFG NDQQQKFLDD GIGGASQTSR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010682712.11e-149PREDICTED: transcription factor TCP20-like
TrEMBLA0A0J8C1R21e-149A0A0J8C1R2_BETVU; Uncharacterized protein
STRINGVIT_14s0068g01690.t016e-35(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.11e-23TCP family protein