PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv2_026370_rgfy.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family TCP
Protein Properties Length: 267aa    MW: 30974.9 Da    PI: 6.7452
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv2_026370_rgfy.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP84.82.1e-26213327137
                 TCP  27 ecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...ssssasec.eaesssssasnsssg...............kaaksaa.ks 97 
                         ++a++fFdLqd+LGfdk+skt+ WL+ ++k+ai+el+++   +s+++sec ++++++ ++++++++               + ++s++ k+
  Bv2_026370_rgfy.t1   2 SIAREFFDLQDMLGFDKASKTLGWLFAKSKAAIDELVRSsncKSNTNSEChDHGHEHDQHEHEHEHehddddekksldhkkS-SSSKKrKN 91 
                         69*************************************8776666688974444444444444445577887777655421.22222233 PP

                 TCP  98 kksqksaasalnlak..esrakarararertrekmriknkln 137
                         k++   + +++n+a+  + r++ar rarertr+k+  ++++n
  Bv2_026370_rgfy.t1  92 KENCVVDVHHQNIANemKRREEARNRARERTRKKKLVDDHNN 133
                         33333333445555544455**************99887776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136922.255137IPR017887Transcription factor TCP subgroup
PfamPF036344.5E-222126IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MSIAREFFDL QDMLGFDKAS KTLGWLFAKS KAAIDELVRS SNCKSNTNSE CHDHGHEHDQ  60
HEHEHEHEHD DDDEKKSLDH KKSSSSKKRK NKENCVVDVH HQNIANEMKR REEARNRARE  120
RTRKKKLVDD HNNQLLHNHH HHHHHHQCVQ QDLLISQSSS SAAATPNNKY GLISKEVSVG  180
ESVEIKCNKS SSESSYNYNY EMLSLKDDQE HCNYYNDYLN KSASEYCNYG GINMLSSGFP  240
AVNIINLSTE IHINARPWDD YFDQVLH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1108125KRREEARNRARERTRKKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019103776.10.0PREDICTED: transcription factor DICHOTOMA-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.28e-14TCP family protein