PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bostr.9345s0024.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
Family bZIP
Protein Properties Length: 262aa    MW: 29304.4 Da    PI: 8.975
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bostr.9345s0024.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.62e-16191239554
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                          +r++r++kNRe+A rsR+RK+a++ eLe kv  Le+eN++L+ +l+e +k
  Bostr.9345s0024.1.p 191 RRQKRMIKNRESAARSRARKQAYTHELEIKVSRLEEENEKLR-RLKEVEK 239
                          79***************************************9.8887776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.6E-14184233No hitNo description
SMARTSM003383.4E-11187243IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.197189233IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.19E-10191233No hitNo description
CDDcd147078.08E-23191236No hitNo description
PfamPF001702.9E-13191233IPR004827Basic-leucine zipper domain
PROSITE patternPS000360194209IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MGSIRGNIEE PISQSLTRQN SLYSLKLHEV QTHLGSSGKP LGSMNLDELL KTVLSPAEEG  60
LVRQGSLTLP LDLSKKTVDE VWRDIQQDKN GNSTSTTTTQ KQPTLGEITL EDLLLKAGVV  120
TETIVPQENV VNIASHGQWV EYHQPGQQLG FMPYPVCEMQ EIVVMGGLSD TPQAPGRKRV  180
AGEIVEKTVE RRQKRMIKNR ESAARSRARK QAYTHELEIK VSRLEEENEK LRRLKEVEKI  240
LPSEPPPDPK WKLRRTSSAS L*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0251750.0BT025175.1 Arabidopsis thaliana At2g41070 mRNA, complete cds.
GenBankAY0846680.0AY084668.1 Arabidopsis thaliana clone 114632 mRNA, complete sequence.
GenBankAF3342090.0AF334209.1 Arabidopsis thaliana bZIP protein DPBF4 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002879906.11e-180hypothetical protein ARALYDRAFT_483175
SwissprotQ9C5Q21e-175AI5L3_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 3
TrEMBLD7LGI91e-180D7LGI9_ARALL; Putative uncharacterized protein
STRINGfgenesh2_kg.4__2235__AT2G41070.21e-179(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM18842883
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.31e-160bZIP family protein