PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bostr.7867s1454.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
Family bZIP
Protein Properties Length: 281aa    MW: 31075.2 Da    PI: 10.4348
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bostr.7867s1454.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.91.2e-09215264558
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                          +r +r++kNRe+A rsR    a++ eLe +v+ L+aeN +Lk + ++lk  +a+
  Bostr.7867s1454.1.p 215 RRHKRMIKNRESAARSR----AYTNELELEVAHLQAENARLKRQQDQLKMAAAN 264
                          699*************9....7**************************987765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.1E-4207271IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.59E-6215259No hitNo description
CDDcd147071.65E-22215265No hitNo description
Gene3DG3DSA:1.20.5.1708.5E-9215262No hitNo description
PfamPF001701.7E-7215261IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009911Biological Processpositive regulation of flower development
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000028Biological Processregulation of photoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MLSSAKHQRN HRVSATNKNK TLNKVSSISS SSPSSSSSSS TTSSSPLPSQ DSQVQKRSLI  60
TMEEVWKDIN LASIHHINRH SQHPPDNHEP RFRSHNHQNQ NPNSIFQDFL NGPLNQEPVP  120
TNLTIGSASN GDSTTVTALC SSPFPPPATV LSLNSSAAFE FLDNQDPFVT PNSNLHSHHH  180
LSNVPSFNTP FEDLVTSTCF GKKRGQESNE GSGNRRHKRM IKNRESAARS RAYTNELELE  240
VAHLQAENAR LKRQQDQLKM AAANQQPKKN TLQRSFTAPF *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB1058210.0AB105821.1 Arabidopsis thaliana FD mRNA for bZIP transcription factor, complete cds, cultiva:Nossen.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010437403.11e-168PREDICTED: protein FD-like isoform X2
SwissprotQ84JK21e-152FD_ARATH; Protein FD
TrEMBLD7MBR61e-162D7MBR6_ARALL; Predicted protein
STRINGAl_scaffold_0007_4531e-162(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19342772
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.11e-141bZIP family protein