PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bostr.3288s0189.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
Family bZIP
Protein Properties Length: 179aa    MW: 19712.9 Da    PI: 7.0581
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bostr.3288s0189.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.75.2e-134183547
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47
                         ++ +rkq+NRe+ArrsR RK++ ++ L+  v  L +eN +L  
  Bostr.3288s0189.1.p 41 RKRKRKQSNRESARRSRMRKQKHLDDLTVQVTHLRKENAQLVA 83
                         5789***********************************9965 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.9E-123689No hitNo description
SMARTSM003381.4E-1637101IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.77239102IPR004827Basic-leucine zipper domain
PfamPF001701.3E-104182IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.75E-124193No hitNo description
CDDcd147025.04E-194292No hitNo description
PROSITE patternPS0003604459IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009845Biological Processseed germination
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MNNKTEMASS TSGNSSSISI TGLQNSGSES DLRQRDLIDE RKRKRKQSNR ESARRSRMRK  60
QKHLDDLTVQ VTHLRKENAQ LVAGIAVTTQ HYVTIEAEND ILRAQLLELN HRLQSLNEIV  120
DFVESSSSGF GMETGQGLID VGGGGYYDGV MNHMNLGFYN QQPIMASAST AGDVFNCC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14045RKRKRK
24061RKRKRKQSNRESARRSRMRKQK
35360RRSRMRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00239DAPTransfer from AT1G75390Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002887591.11e-114bZIP transcription factor family protein
TrEMBLD7KSN71e-114D7KSN7_ARALL; BZIP transcription factor family protein
STRINGscaffold_202483.11e-113(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM50128154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.12e-99basic leucine-zipper 44