PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bostr.26675s0197.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
Family bZIP
Protein Properties Length: 400aa    MW: 44063 Da    PI: 9.9426
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bostr.26675s0197.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.95e-14320378562
                           CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHH CS
                bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkevaklkse 62 
                           +r++r++kNRe+A rsR+RK+a++ eLe ++++L++ N++L +k+++ +k + ++lk +
  Bostr.26675s0197.1.p 320 RRQKRMIKNRESAARSRARKQAYTLELEAEIESLKQLNQDLqRKQADVMKTQNSELKES 378
                           79***************************************557788888888888876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF819956.02E-5204258No hitNo description
SMARTSM003381.5E-13316381IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.346318382IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.75E-10320369No hitNo description
CDDcd147077.43E-22320364No hitNo description
Gene3DG3DSA:1.20.5.1701.9E-14320380No hitNo description
PfamPF001707.8E-12320378IPR004827Basic-leucine zipper domain
PROSITE patternPS000360323338IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    Send to blast
MGTRIDFDNL GGDSNQSKPL ARQSSLYSLT FDELQSTLGE PGKDFGSMNF DELLKNIWTA  60
EETQAFMTTP SSVAPVGPSG CIPGGNVLQR QGSLTLPRTL SQKTVDEVWK HLNSKDGSNG  120
NSRTDVPERQ QTLGEMTLED FLLRAGVVKE DNNSTQQNEN GFYANNGAAG LGFGFGQPNQ  180
NSISFKGNNN SVILNKAPGL GLEVGGTMQQ QQQQSHQRQQ QQQQPHQRQQ QQQSHQRLRP  240
NIFPKQANVT FAPVNMVNRS LFEAGVDGPV NSNMGGAGVT VAATSPGTSS AENNTWSSPV  300
PYVFSRGRRN NMGLEKVVER RQKRMIKNRE SAARSRARKQ AYTLELEAEI ESLKQLNQDL  360
QRKQADVMKT QNSELKESLK QPPCLAKTQC LRRTLTGPW*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00087SELEXTransfer from AT1G49720Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF0935441e-176AF093544.1 Arabidopsis thaliana clone 1 abscisic acid responsive elements-binding factor (ABRE) mRNA, complete cds.
GenBankBT0086471e-176BT008647.1 Arabidopsis thaliana clone RAFL09-77-C02 (R19471) putative abscisic acid responsive elements-binding factor (At1g49720) mRNA, complete cds.
GenBankBT0085751e-176BT008575.1 Arabidopsis thaliana clone U19471 putative abscisic acid responsive elements-binding factor (At1g49720) mRNA, complete cds.
GenBankAK2269831e-176AK226983.1 Arabidopsis thaliana mRNA for abscisic acid responsive elements-binding factor, complete cds, clone: RAFL09-41-C22.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010479441.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 4 isoform X1
SwissprotQ9M7Q50.0AI5L4_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 4
TrEMBLD7KF130.0D7KF13_ARALL; Abscisic acid responsive element-binding factor 1
STRINGfgenesh2_kg.1__4055__AT1G49720.10.0(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM73427129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49720.10.0abscisic acid responsive element-binding factor 1