PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bostr.25517s0001.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
Family bZIP
Protein Properties Length: 318aa    MW: 34419.5 Da    PI: 9.1965
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bostr.25517s0001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.81.5e-15156209457
                           XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                           +kr +r+ +NRe+ArrsR+RK+a + eLe+ v +L  eN++L k l   ++++ 
  Bostr.25517s0001.1.p 156 VKRVKRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSKLLKGLTDVTQTSN 209
                           79****************************************999888877765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.7E-17153217IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.841155206IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.85E-12156206No hitNo description
PfamPF001701.5E-13156205IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.7E-11156206No hitNo description
PROSITE patternPS000360160175IPR004827Basic-leucine zipper domain
PfamPF124982.0E-12224268IPR020983Basic leucine-zipper, C-terminal
PfamPF124981.9E-5285313IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MEKDEISGNH HWSVVDGTKA MNLSASEWAF QRFIQESFAA VDDTNAGDSA TASCGVSVSS  60
PPNVPVDSEE YRAFLKSKLN LACAAVAMKR GSFIKPLDTS GRSDNGGAYT SSTSEQGSLA  120
SFKATPMMSS AITSGSEHSG DEEEADGETN MNPTNVKRVK RMLSNRESAR RSRRRKQAHL  180
SELETQVSQL RVENSKLLKG LTDVTQTSNA AAVENRVLKA NIETLRAKVK MAEETVKRLT  240
GFNPMFHTMP QIVSTVSLPS ETSNSLDTTS SHVTAPEIIS SGNKSKALIG CKMNRTASMR  300
RVESLEHLQK RIRSVGD*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1169176RRSRRRKQ
2171176SRRRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3171690.0AK317169.1 Arabidopsis thaliana AT5G28770 mRNA, complete cds, clone: RAFL21-54-H13.
GenBankAJ0108580.0AJ010858.1 Arabidopsis thaliana mRNA for bZIP protein BZ3.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002874448.10.0hypothetical protein ARALYDRAFT_489663
SwissprotB9DGI80.0BZP63_ARATH; Basic leucine zipper 63
TrEMBLD7M6Y60.0D7M6Y6_ARALL; Putative uncharacterized protein
STRINGfgenesh2_kg.6__2797__AT5G28770.20.0(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM68462743
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.21e-177bZIP family protein