PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bostr.19424s0909.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
Family bZIP
Protein Properties Length: 150aa    MW: 16772.6 Da    PI: 8.4841
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bostr.19424s0909.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.33.2e-1377136261
                           XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                           ke +  +r+ +NR++A+  R+RKk ++  Le ++ eL++ N++L +++++l +e   l++
  Bostr.19424s0909.1.p  77 KEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEKISTLMNENTMLRK 136
                           778889***********************************************9987765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-1276140IPR004827Basic-leucine zipper domain
PfamPF001701.3E-1277136IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.43878141IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.44E-1380138No hitNo description
CDDcd147043.09E-1582131No hitNo description
Gene3DG3DSA:1.20.5.1706.1E-1782139No hitNo description
PROSITE patternPS0003608398IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010224Biological Processresponse to UV-B
GO:0080167Biological Processresponse to karrikin
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    Send to blast
MSLQRPNGNS SSSSSPKTHK TEESDEELLM VPDMEAAGST CVLSSSADDG VNNPELDPAQ  60
NGASTAKRRR GRNPVDKEYR SLKRLLRNRV SAQQARERKK VYVSDLESRA NELQNNNDQL  120
EEKISTLMNE NTMLRKMLIN TRPKTDDNH*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1755230.0AK175523.1 Arabidopsis thaliana mRNA for bZip transcription factor AtbZip64, complete cds, clone: RAFL21-94-F18.
GenBankAK1754400.0AK175440.1 Arabidopsis thaliana mRNA for bZip transcription factor AtbZip64, complete cds, clone: RAFL21-87-C16.
GenBankAF4534770.0AF453477.1 Arabidopsis thaliana HY5-like protein (HYH) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_850605.13e-92transcription factor HY5-like protein
SwissprotQ8W1913e-94HYH_ARATH; Transcription factor HY5-like
TrEMBLV4LCK32e-91V4LCK3_EUTSA; Uncharacterized protein
STRINGAT3G17609.28e-92(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM102661829
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17609.21e-83HY5-homolog