PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bostr.18722s0001.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
Family bZIP
Protein Properties Length: 264aa    MW: 29462.3 Da    PI: 6.8957
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bostr.18722s0001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.49.9e-11182223546
                           CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                           kr +r   NR +A+rsR RK+++i eLe+ v +L+ae + L 
  Bostr.18722s0001.1.p 182 KRVKRILANRQSAQRSRVRKLQYITELERSVTSLQAEVSVLS 223
                           8999********************************987665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-12178242IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.576180232IPR004827Basic-leucine zipper domain
PfamPF077161.6E-9180227IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-12182232No hitNo description
SuperFamilySSF579594.29E-11182233No hitNo description
CDDcd147038.02E-24183233No hitNo description
PROSITE patternPS000360185200IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MAQLPPKIPN MTPHWPDFSS QKLSPFSTPT ATVVAAVTTA STAVQNPSWV DEFLDFSASR  60
RGNHRRSISD SIAFLEAPTV SIENHHFDRF DDEQFMSMFT DDEDLHSNPP HINNNNNVGP  120
TGSSSNTSTP SNSINDDNKN MNSNNNNNND EIQSRCKTER EDGTASNNNS GDSSGNRILD  180
PKRVKRILAN RQSAQRSRVR KLQYITELER SVTSLQAEVS VLSPRVAFLD HQRLLFNVDN  240
SALKQRIAAL SQDKIFKDGK FSLS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY0746571e-142AY074657.1 Arabidopsis thaliana At2g42380/MHK10.10 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006294608.11e-143hypothetical protein CARUB_v10023644mg
SwissprotF4IN231e-142BZP34_ARATH; Basic leucine zipper 34
TrEMBLR0FXS21e-143R0FXS2_9BRAS; Uncharacterized protein
STRINGAT2G42380.21e-139(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM17532777
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.21e-55bZIP family protein