PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bostr.15774s0073.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
Family bZIP
Protein Properties Length: 148aa    MW: 16580.5 Da    PI: 8.9938
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bostr.15774s0073.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1231.8e-071581463
                          XCHHHCHHHHHHHHHHHHHHHHHHHH.......HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeie.......eLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                           k+ +rk +NRe+ArrsR++K++ +e        Le+++ke ++  +a k++l++ + e a l+se+
  Bostr.15774s0073.1.p 15 EKKRKRKLSNRESARRSRLKKQKLMEdtiheisSLERRIKENSERCRAVKERLDSVESENAVLRSEK 81
                          5999******************966522222227999999999999999999999999999998876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.2E-91095No hitNo description
SMARTSM003387.1E-91276IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.0821477IPR004827Basic-leucine zipper domain
PfamPF077166.1E-61453IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.34E-61665No hitNo description
CDDcd147022.50E-111768No hitNo description
PROSITE patternPS0003601934IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006521Biological Processregulation of cellular amino acid metabolic process
GO:0009267Biological Processcellular response to starvation
GO:0009617Biological Processresponse to bacterium
GO:0009651Biological Processresponse to salt stress
GO:0009901Biological Processanther dehiscence
GO:0010182Biological Processsugar mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    Send to blast
MANAEKTSSG SDIDEKKRKR KLSNRESARR SRLKKQKLME DTIHEISSLE RRIKENSERC  60
RAVKERLDSV ESENAVLRSE KTWLSSYVSD LENMIATTSL TLTQSGGGGG DCDEDQNANA  120
EIGVGDCRRR RPWKLSCDSL TTTSRVL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11421EKKRKRKL
21520KKRKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0026881e-152CP002688.1 Arabidopsis thaliana chromosome 5 sequence.
GenBankBT0004001e-152BT000400.1 Arabidopsis thaliana putative protein (At5g49450) mRNA, complete cds.
GenBankAY1363071e-152AY136307.1 Arabidopsis thaliana putative protein (At5g49450) mRNA, complete cds.
GenBankAY0882071e-152AY088207.1 Arabidopsis thaliana clone 43004 mRNA, complete sequence.
GenBankAB0230341e-152AB023034.1 Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K7J8.
GenBankAF4006181e-152AF400618.1 Arabidopsis thaliana transcription factor-like protein bZIP1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010440575.13e-85PREDICTED: basic leucine zipper 1-like
SwissprotQ9FGX27e-84BZIP1_ARATH; Basic leucine zipper 1
TrEMBLE4MW626e-80E4MW62_EUTHA; mRNA, clone: RTFL01-02-E19
TrEMBLV4KY626e-80V4KY62_EUTSA; Uncharacterized protein
STRINGAT5G49450.12e-81(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM125812231
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49450.11e-74basic leucine-zipper 1