PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bostr.13671s0096.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
Family bZIP
Protein Properties Length: 197aa    MW: 22889.1 Da    PI: 5.9572
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bostr.13671s0096.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.21.7e-1386136555
                           CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                           +++rr+++NRe+ArrsR RK+  ++eL   v  L + N+ L+++l+++++ 
  Bostr.13671s0096.1.p  86 RKQRRMISNRESARRSRMRKQRHLDELWSQVIRLRTDNHCLIDKLNRISQS 136
                           79********************************************99875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-1382146IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.1E-1184136No hitNo description
PROSITE profilePS5021710.23184136IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.09E-1286135No hitNo description
PfamPF001705.9E-1186136IPR004827Basic-leucine zipper domain
CDDcd147021.40E-1787137No hitNo description
PROSITE patternPS00036089104IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MNTIPAELTG YFHYLSPDKY NNQTPIMESE YFNMPSSPTS SSSFYHLNGL INNNNYSSSS  60
TGQDLMTSNN STSDEDHQQS MIIDERKQRR MISNRESARR SRMRKQRHLD ELWSQVIRLR  120
TDNHCLIDKL NRISQSHELA LKENAKLKEE TSDLRQLISE IKSNNEDDNS FLRELEDSIS  180
NSRSDSNQRG RDFELC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
198105RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankF21F230.0AC027656.4 Sequence of BAC F21F23 from Arabidopsis thaliana chromosome 1, complete sequence.
GenBankAC0271340.0AC027134.4 Arabidopsis thaliana chromosome I BAC F13B4 genomic sequence, complete sequence.
GenBankCP0026840.0CP002684.1 Arabidopsis thaliana chromosome 1 sequence.
GenBankAF3324300.0AF332430.1 Arabidopsis thaliana clone C00105 (e) putative bZIP transcription factor (At1g13600) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_172817.21e-129basic leucine-zipper 58
SwissprotQ9FMC21e-35BZP43_ARATH; Basic leucine zipper 43
TrEMBLQ9LMY81e-129Q9LMY8_ARATH; Basic leucine-zipper 58
STRINGAT1G13600.11e-128(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM28922469
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13600.11e-125basic leucine-zipper 58