PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bostr.13129s0288.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
Family bZIP
Protein Properties Length: 461aa    MW: 50936.4 Da    PI: 7.0825
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bostr.13129s0288.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1331.3e-10161189533
                           CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                           k  rr+++NReAAr+sR+RKka++++Le 
  Bostr.13129s0288.2.p 161 KTLRRLAQNREAARKSRLRKKAYVQQLES 189
                           7789***********************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.8E-9152205No hitNo description
SMARTSM003385.6E-7157245IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.737159203IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.01E-7161202No hitNo description
CDDcd147081.81E-22161213No hitNo description
PfamPF001709.6E-8161191IPR004827Basic-leucine zipper domain
PROSITE patternPS000360164179IPR004827Basic-leucine zipper domain
PfamPF141441.8E-30254328IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    Send to blast
MQGHHQNHHQ HISSASATSS SHGNFMNKDG YDIGEIDPSL FLYLDGQGHH DPPSTAPPPL  60
PHHHHTTQNL AMRPPTSTLN IFPSQPMHIE PAPSSTPNTD NAKLVPAAQP SGSTRPSSEP  120
SMDLTNHSQF QPPQASKSIK EGSRKGPASS DHDIPKSSDP KTLRRLAQNR EAARKSRLRK  180
KAYVQQLESC RIKLTQLEQE IQRARSQGVF FGGSLIGGDQ QQGGLPIGPG HISSEAAVFD  240
MEYARWLEEQ QRLLTELRVA TQEHLAENEL RMFVDTCLAH YDHLINLKAM VAKTDVFHLI  300
SGAWKTPAER CFLWMGGFRP SEIIKVIVNQ IEPLTEQQIV GICGLQQSTQ EAEEALSQGL  360
EALNQSLSDS IVSDSLSPAS APLPPHLANF MSHMSLALNK LSALEGFVLQ ADNLRHQIIH  420
RLNQLLTTRQ EARCLLAVAE YFHRLQALSS LWLARPRQDG *
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ1327420.0HQ132742.1 Arabidopsis thaliana bZIP65 (At5g06839) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001190244.10.0bZIP transcription factor TGA10
SwissprotQ415581e-126HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLE3VNM40.0E3VNM4_ARATH; BZIP transcription factor TGA10
STRINGAT5G06839.30.0(Arabidopsis thaliana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.30.0bZIP family protein