PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bostr.13129s0279.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
Family bZIP
Protein Properties Length: 331aa    MW: 36672.2 Da    PI: 9.0124
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bostr.13129s0279.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.76.6e-104586445
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                           k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  Bostr.13129s0279.1.p 45 QKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 86
                          5888*************************9877777766555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.1E-83989No hitNo description
SMARTSM003384.9E-842105IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.4384488IPR004827Basic-leucine zipper domain
PfamPF001706.4E-74686IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.94E-74689No hitNo description
PROSITE patternPS0003604964IPR004827Basic-leucine zipper domain
PfamPF141448.0E-35128203IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MADTSPRTDV STDEDTDHPD LGSEGALANT AASDSSDRSK GKMDQKTLRR LAQNREAARK  60
SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGVFISSTG DQAHSTGGNG ALAFDAEHSR  120
WLEEKNKQMN ELRSALNAHA GDAELRTIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK  180
TPAERCFLWL GGFRSSELLK LLANQLEPMT ERQLMGINNL QQTSQQAEDA LSQGMESLQQ  240
SLADTLSSGT LGSSSSGNVA SYMGQMAMAM GKLGTLEGFI RQADNLRLQT LQQMIRVLTT  300
RQSARALLAI HDYFSRLRAL SSLWLARPRE *
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankATHAHBP1B0.0D10042.1 Arabidopsis thaliana mRNA for AHBP-1b, complete cds.
GenBankBT0061340.0BT006134.1 Arabidopsis thaliana clone U50303 putative bZIP transcription factor, HBP-1b homolog (At5g06950) mRNA, complete cds.
GenBankAK1176860.0AK117686.1 Arabidopsis thaliana At5g06950 mRNA for putative bZip transcription factor AtbZip20/tga2, complete cds, clone: RAFL17-34-M19.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010491283.10.0PREDICTED: transcription factor TGA2
RefseqXP_010491282.10.0PREDICTED: transcription factor TGA2
RefseqXP_010491280.10.0PREDICTED: transcription factor TGA2
RefseqXP_010491279.10.0PREDICTED: transcription factor TGA2
RefseqXP_010491278.10.0PREDICTED: transcription factor TGA2
RefseqXP_010491277.10.0PREDICTED: transcription factor TGA2
RefseqXP_010452644.10.0PREDICTED: transcription factor TGA2
RefseqXP_010452643.10.0PREDICTED: transcription factor TGA2
RefseqXP_010423271.10.0PREDICTED: transcription factor TGA2
RefseqXP_010423270.10.0PREDICTED: transcription factor TGA2
SwissprotP432730.0TGA2_ARATH; Transcription factor TGA2
TrEMBLB2BDX50.0B2BDX5_ARALY; BZIP transcription factor TGA2
STRINGAT5G06950.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM66728133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.40.0bZIP family protein