PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bostr.13129s0278.3.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
Family bZIP
Protein Properties Length: 311aa    MW: 34866.4 Da    PI: 9.8651
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bostr.13129s0278.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.96.1e-102566445
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                           k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  Bostr.13129s0278.3.p 25 QKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 66
                          5888*************************9877777766555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.8E-82069No hitNo description
SMARTSM003381.9E-72285IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.4382468IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.06E-72669No hitNo description
PfamPF001705.8E-72666IPR004827Basic-leucine zipper domain
PROSITE patternPS0003602944IPR004827Basic-leucine zipper domain
PfamPF141445.9E-33108183IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009863Biological Processsalicylic acid mediated signaling pathway
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MQFDEGHLGI GASDSSDRSK GKMDQKTLRR LAQNREAARK SRLRKKAYVQ QLENSRLKLT  60
QLEQELQRAR QQGVFISSSG DQAHSTAGDG AMAFDVEYRR WQEDKNRQMK ELSAALDSHA  120
TDAELRIIVD GVIAHYEELY RIKGNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK  180
LIANQLEPLT EQQSLDINNL QQSSRQTEDA LSQGMDNLQQ SLADTLSSGT LGSSTSGNVA  240
SYMGQMAMAM GKLGTLEGFI RQADNLRLQT YQQMVRILTT RQSARALLAV HNYSLRLRAL  300
SSLWLARPRE *
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00493DAPTransfer from AT5G06960Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY1438640.0AY143864.1 Arabidopsis thaliana At5g06960/MOJ9_13 mRNA, complete cds.
GenBankAY0588300.0AY058830.1 Arabidopsis thaliana AT5g06960/MOJ9_13 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010423276.10.0PREDICTED: transcription factor TGA5-like isoform X3
SwissprotQ391630.0TGA5_ARATH; Transcription factor TGA5
TrEMBLD7LZV90.0D7LZV9_ARALL; Ocs-element binding factor 5
STRINGfgenesh2_kg.6__648__AT5G06960.10.0(Arabidopsis lyrata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06960.21e-179OCS-element binding factor 5