PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bostr.0568s0198.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
Family bZIP
Protein Properties Length: 204aa    MW: 23457.7 Da    PI: 10.4367
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bostr.0568s0198.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.92.1e-0884132149
                          XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                          +k+++r +rk +NR +A+rsR +K++ +e  + k  +L+ eN++L ++l
  Bostr.0568s0198.1.p  84 DKDDRRKKRKLSNRKSAQRSRIKKQKHLEDVRSKLNQLKLENRELENRL 132
                          6899****************************************99776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.7E-1081132No hitNo description
SMARTSM003382.1E-784155IPR004827Basic-leucine zipper domain
PfamPF077164.0E-585132IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.18586132IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.86E-888135No hitNo description
PROSITE patternPS00036091106IPR004827Basic-leucine zipper domain
CDDcd147021.14E-1194133No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MSTISPVFSS EPVLSNHVPA FETGFTPWDT SDLFPIFNTP VSPMEVNPGL EKTNPSQIQN  60
QRYSSLRLKD KPLNHTGSNG DSSDKDDRRK KRKLSNRKSA QRSRIKKQKH LEDVRSKLNQ  120
LKLENRELEN RLRYFCTIGE RAKMENDHLR LEHHVLHEKL LSLRQALVMR QIQQNSTCGT  180
WSCVNSTVVT VQPNPSMMRD HVI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18693DRRKKRKL
287108RRKKRKLSNRKSAQRSRIKKQK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010463712.11e-117PREDICTED: basic leucine zipper 43-like
TrEMBLD7MXA71e-107D7MXA7_ARALL; Putative uncharacterized protein
STRINGscaffold_33400002.11e-107(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM33382665
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.14e-28basic leucine-zipper 5