PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast10G006600.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 176aa    MW: 19236.6 Da    PI: 8.836
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast10G006600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1284.6e-0968117251
                         XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                         ++l+r rr+++NRe+ArrsR+RK+  +ee +   ++L a N++L+ +l +
  Brast10G006600.1.p  68 ERLRRLRRRISNRESARRSRKRKQRHLEEQRATEAALRAGNRDLAARLRH 117
                         5799*****************************************98876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.2E-564146No hitNo description
SMARTSM003380.003767131IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.87569119IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.78E-570120No hitNo description
PROSITE patternPS0003607489IPR004827Basic-leucine zipper domain
CDDcd147021.52E-1077111No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MAALEMEMPM LPFFPDDIDA FLADIGLGFD DHEAPTPPPA LCTSPEEETS AGTVGGATDA  60
GAGDDDRERL RRLRRRISNR ESARRSRKRK QRHLEEQRAT EAALRAGNRD LAARLRHARA  120
RAAFAAMANA RLRSEAHALS LRLQRLSSFF PVSGAGTQAP AALLHHQDAF FSFSC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17389RRRISNRESARRSRKRK
28389RRSRKRK
38390RRSRKRKQ
48590SRKRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast10G006600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003579093.22e-42ocs element-binding factor 1
TrEMBLA0A3B6LFC24e-26A0A3B6LFC2_WHEAT; Uncharacterized protein
STRINGBRADI4G00810.18e-42(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP151251919