PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast09G226400.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 413aa    MW: 45944 Da    PI: 5.3361
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast09G226400.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.21.3e-11115157241
                         XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
              bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                         +++k+ rr+++NReAAr+sR+RKka+i++Le+   k ++Le+e
  Brast09G226400.2.p 115 PPDKVLRRLAQNREAARKSRLRKKAYIQQLETsriKLAQLEQE 157
                         5799**************************9722244444444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.9E-8113161No hitNo description
SMARTSM003382.6E-5114167IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.887116160IPR004827Basic-leucine zipper domain
PfamPF001702.2E-8116156IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-7118162No hitNo description
PROSITE patternPS000360121136IPR004827Basic-leucine zipper domain
PfamPF141443.1E-27208285IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009409Biological Processresponse to cold
GO:0042742Biological Processdefense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MELYPGYLED HFNIHKLSGA GTSPPEYMTS ASAQFAPAPL RMGMYERPPP PQQQPQPVVG  60
MWNSVDTYKV DSGQATSGST IMEADPKFDD PELEEVPGME ELEPARDVDQ EASKPPDKVL  120
RRLAQNREAA RKSRLRKKAY IQQLETSRIK LAQLEQELQR ARQQQGAVYP PGMSSGMAGF  180
GGGGVPMDSG VAAFEIEYGH WVDEQNRHTR ELRGALQPGQ QTTELELRML VETGLGNYDH  240
LFRIKNLAAS ADVFCVMSGM WRSPAERFFL WIGGFRPSEV LKVLRPQLEP LTDQQLEQVY  300
HLQQSSTQAE DALSQGMERL QQTLADALTA AADPFASPDA YSGMNDAIAK LKGLVCFLHQ  360
ADHLRLETLQ QMQKILTTRQ AARGLLALGD YFERLRALSS LWAARPRESA IS*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00502DAPTransfer from AT5G10030Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast09G226400.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003580646.10.0transcription factor TGAL6
SwissprotA0A0P0WFC80.0TGAL6_ORYSJ; Transcription factor TGAL6
TrEMBLA0A0Q3KXI50.0A0A0Q3KXI5_BRADI; Uncharacterized protein
STRINGBRADI5G23340.10.0(Brachypodium distachyon)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10030.21e-108TGACG motif-binding factor 4
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Okada A, et al.
    OsTGAP1, a bZIP transcription factor, coordinately regulates the inductive production of diterpenoid phytoalexins in rice.
    J. Biol. Chem., 2009. 284(39): p. 26510-8
    [PMID:19635799]
  3. Okada K
    The biosynthesis of isoprenoids and the mechanisms regulating it in plants.
    Biosci. Biotechnol. Biochem., 2011. 75(7): p. 1219-25
    [PMID:21737944]
  4. Yamane H
    Biosynthesis of phytoalexins and regulatory mechanisms of it in rice.
    Biosci. Biotechnol. Biochem., 2013. 77(6): p. 1141-8
    [PMID:23748776]
  5. Miyamoto K, et al.
    Identification of target genes of the bZIP transcription factor OsTGAP1, whose overexpression causes elicitor-induced hyperaccumulation of diterpenoid phytoalexins in rice cells.
    PLoS ONE, 2014. 9(8): p. e105823
    [PMID:25157897]
  6. Miyamoto K, et al.
    Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells.
    J. Plant Physiol., 2015. 173: p. 19-27
    [PMID:25462074]