PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast08G104100.10.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 431aa    MW: 47328.2 Da    PI: 4.9643
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast08G104100.10.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.91.6e-11198226533
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                          k err+++NReAAr+sR+RKka++++Le+
  Brast08G104100.10.p 198 KTERRLAQNREAARKSRLRKKAYVQQLET 226
                          88*************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.5E-8193240No hitNo description
SMARTSM003389.5E-5194253IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.22196240IPR004827Basic-leucine zipper domain
PfamPF001707.4E-9198226IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.5E-7198239No hitNo description
PROSITE patternPS000360201216IPR004827Basic-leucine zipper domain
PfamPF141442.8E-27279353IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    Send to blast
MVQGEESSWR MASDRDRAVP FGQALAYGIQ VHAPAAPPAN FLELQPAAAA YFGELGEALI  60
HGTCAGVNPV MIEGDAHTKS AAYLAARPPT LEIFPSWPMN HLQQPYSANS QSVGSTDSSS  120
AQNTMSQAEL VSPVSMRTDS GQQQEVLMVT IDDYNYNQGL GPAAAATVTA PSFQQHAGGQ  180
DKRKHGSTRK DDKLLDPKTE RRLAQNREAA RKSRLRKKAY VQQLETGRIR LQQIEQELQR  240
GRSQGLLTGG CSAPGDMSPG AVMFDMEYAR WLDEDSKYMI ELQSALQAQI LDGNLGTIVE  300
ECLRHYDELF HLRGVLARSD VFHLMTGMWA TQSERCFLWM AGFRPSEILK MLTPQLDPLT  360
EQQLLGMFNL QQSSEQAEEA LAQGLHQLHQ SLADAVGAGP LNDGADVANY TSLMALALDR  420
LDNLESFYRE *
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast08G104100.10.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014755255.10.0transcription factor TGAL5 isoform X1
RefseqXP_014755258.10.0transcription factor TGAL5 isoform X1
RefseqXP_014755259.10.0transcription factor TGAL5 isoform X1
RefseqXP_024315088.10.0transcription factor TGAL5 isoform X1
RefseqXP_024315089.10.0transcription factor TGAL5 isoform X1
RefseqXP_024315090.10.0transcription factor TGAL5 isoform X1
RefseqXP_024315094.10.0transcription factor TGAL5 isoform X5
SwissprotQ6F2N00.0TGAL5_ORYSJ; Transcription factor TGAL5
TrEMBLA0A2K2DA630.0A0A2K2DA63_BRADI; Uncharacterized protein
STRINGBRADI2G23890.10.0(Brachypodium distachyon)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-102bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Cheng CH, et al.
    A fine physical map of the rice chromosome 5.
    Mol. Genet. Genomics, 2005. 274(4): p. 337-45
    [PMID:16261349]
  3. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]