PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast07G071700.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 338aa    MW: 36597.8 Da    PI: 9.3576
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast07G071700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.61.8e-15247297554
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke.leelkk 54 
                         +r+rr++kNRe+A rsRqRK+a+i eLe +v++L++ N++L+k+ +e+l++
  Brast07G071700.1.p 247 RRQRRMIKNRESAARSRQRKQAYIMELEAEVAKLKEHNEELQKKqVEMLQE 297
                         79*************************************997541555554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.0E-12243308IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.392245297IPR004827Basic-leucine zipper domain
PfamPF001701.1E-13247298IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.56E-11247296No hitNo description
Gene3DG3DSA:1.20.5.1701.5E-15247299No hitNo description
CDDcd147072.58E-25247299No hitNo description
PROSITE patternPS000360250265IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009737Biological Processresponse to abscisic acid
GO:0009739Biological Processresponse to gibberellin
GO:0010187Biological Processnegative regulation of seed germination
GO:0010200Biological Processresponse to chitin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048316Biological Processseed development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MEMPGGSGAP ALARQGSIYS LTFDEFQSAL GGAGKDFGSM NMDELLRNIW TAEESNAIAA  60
AATATTAVPA SNVDAQPPPP QQAILRQGSL TLPRTLSQMT VDEVWRDIMG FCDDEPEAPA  120
PAQLPAQAQR QPTLGAMTLE EFLVRAGVVR EDMGGQTVVV PARAQALFPQ SNVVTPTMQV  180
GNGMVHGVVG QGAGGGMTVA APATPGVLNG FGKVEGGDLS SLSPVPYPFD SALRVRKGPT  240
VEKVVERRQR RMIKNRESAA RSRQRKQAYI MELEAEVAKL KEHNEELQKK QVEMLQEQKN  300
EKISSITRER YVARRPYKKS RMSMVGALQR RLDLDRL*
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in abscisic acid (ABA) signaling pathway (PubMed:20576316, PubMed:19947981, PubMed:21546455, PubMed:22301130, PubMed:26300907, PubMed:27468891). Transcription factor activity is fully activated by ABA (PubMed:19947981, PubMed:26300907, PubMed:27468891). Acts as positive regulator of the expression of abiotic stress-responsive genes through an ABA-dependent signaling pathway (PubMed:20576316). Acts as positive regulator of ABA signaling and drought stress tolerance (PubMed:22301130). Plays an important role in ABA and auxin responses. Involved in ABA signaling and stress responses by directly binding to the ABA-responsive element (ABRE)-containing genes, especially WRKY family genes. Modulates response to auxin. Suppresses auxin signaling by targeting ABRE-containing genes related to auxin metabolism or signaling (PubMed:21546455). {ECO:0000269|PubMed:19947981, ECO:0000269|PubMed:20576316, ECO:0000269|PubMed:21546455, ECO:0000269|PubMed:22301130, ECO:0000269|PubMed:26300907, ECO:0000269|PubMed:27468891}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00294DAPTransfer from AT2G36270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast07G071700.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by abscisic acid (ABA) (PubMed:20576316, PubMed:18315698, PubMed:21546455, PubMed:22301130). Induced by auxin (PubMed:21546455, PubMed:22301130). Induced by gibberellin (PubMed:21546455). Induced by salt and drought stresses (PubMed:20576316, PubMed:21546455, PubMed:22301130). Induced by cold stress (PubMed:20576316). Induced by oxidative stress (PubMed:20576316, PubMed:22301130). {ECO:0000269|PubMed:18315698, ECO:0000269|PubMed:20576316, ECO:0000269|PubMed:21546455, ECO:0000269|PubMed:22301130}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3633300.0AK363330.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2014H23.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003564107.10.0bZIP transcription factor 46
SwissprotQ69TW51e-128BZP46_ORYSJ; bZIP transcription factor 46
TrEMBLI1GZV50.0I1GZV5_BRADI; Uncharacterized protein
STRINGBRADI1G46060.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP70638147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.11e-43ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Hossain MA, et al.
    The ABRE-binding bZIP transcription factor OsABF2 is a positive regulator of abiotic stress and ABA signaling in rice.
    J. Plant Physiol., 2010. 167(17): p. 1512-20
    [PMID:20576316]
  3. Yang X, et al.
    Rice ABI5-Like1 regulates abscisic acid and auxin responses by affecting the expression of ABRE-containing genes.
    Plant Physiol., 2011. 156(3): p. 1397-409
    [PMID:21546455]
  4. Li YS, et al.
    A novel nuclear protein phosphatase 2C negatively regulated by ABL1 is involved in abiotic stress and panicle development in rice.
    Mol. Biotechnol., 2013. 54(2): p. 703-10
    [PMID:23086454]
  5. Guo C,Ge X,Ma H
    The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages.
    Plant Mol. Biol., 2013. 82(3): p. 239-53
    [PMID:23686450]
  6. Huang X, et al.
    OsSLI1, a homeodomain containing transcription activator, involves abscisic acid related stress response in rice (Oryza sativa L.).
    ScientificWorldJournal, 2014. 2014: p. 809353
    [PMID:25089296]
  7. Kim N, et al.
    Functional characterization and reconstitution of ABA signaling components using transient gene expression in rice protoplasts.
    Front Plant Sci, 2015. 6: p. 614
    [PMID:26300907]
  8. Chen H, et al.
    Characterization of OsPM19L1 encoding an AWPM-19-like family protein that is dramatically induced by osmotic stress in rice.
    Genet. Mol. Res., 2015. 14(4): p. 11994-2005
    [PMID:26505346]
  9. Tang N, et al.
    MODD Mediates Deactivation and Degradation of OsbZIP46 to Negatively Regulate ABA Signaling and Drought Resistance in Rice.
    Plant Cell, 2016. 28(9): p. 2161-2177
    [PMID:27468891]