PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast05G092200.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 154aa    MW: 17091.2 Da    PI: 8.9903
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast05G092200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.56e-133074347
                        XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47
                        e +r rrk++NRe+ArrsR RK++ ++ L   v++L+++ ++L  
  Brast05G092200.1.p 30 EKRRKRRKESNRESARRSRVRKQQHLDDLSSQVDQLKNQKQQLGM 74
                        5689************************************99965 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.0E-132892IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.7033072IPR004827Basic-leucine zipper domain
PfamPF001701.3E-93073IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.94E-113285No hitNo description
Gene3DG3DSA:1.20.5.1702.0E-103287No hitNo description
CDDcd147025.43E-163372No hitNo description
PROSITE patternPS0003603550IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    Send to blast
MSSGTSFGSS LGTRSSRSEE DDMDLQAQME KRRKRRKESN RESARRSRVR KQQHLDDLSS  60
QVDQLKNQKQ QLGMALGVTT QNLVAVQTQN SVMQIQKLEL ESKQCALREI ICCMNSIGNT  120
TNPATVGIPT GSGYDIFGTS STWSQPIDLY QCI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13036KRRKRRK
23237RKRRKE
34450RRSRVRK
44451RRSRVRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast05G092200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003577967.11e-102bZIP transcription factor 44
TrEMBLI1IP941e-100I1IP94_BRADI; Uncharacterized protein
STRINGBRADI4G27720.11e-101(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37403276
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.16e-11basic leucine-zipper 44