PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast05G002900.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 555aa    MW: 60703.8 Da    PI: 7.2759
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast05G002900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.62.1e-11248276533
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                         k  rr+++NReAAr+sR+RKka+i++Le 
  Brast05G002900.1.p 248 KTMRRLAQNREAARKSRLRKKAYIQQLES 276
                         7789***********************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0027242319IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.09E-6248283No hitNo description
PfamPF001706.7E-9248276IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.3E-7249276No hitNo description
PROSITE patternPS000360251266IPR004827Basic-leucine zipper domain
PfamPF141441.1E-28328402IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 555 aa     Download sequence    Send to blast
MEEGSSSSGH HHHPRHHSSK DPHQQQVLAG YGAGVVGFHG AAAAMPTTTS SSMPSASFFA  60
EQEEGAGYLG ELEEALMHHH HHHHHQAGGS SSSKNTTTHH LLHQQTGAAA HHSHGHGHNN  120
STMAAMAIPM PFHAGTTATA AAAVRPPPTL DIFPSWPIRP LAPPHHHTPK EGSNVTADST  180
DSESSSKNNN IKHSPDHQKG LAVSMPMASQ FHQISQQQQN HQQRQHHHQQ KMATTLSDRT  240
GKALDPNKTM RRLAQNREAA RKSRLRKKAY IQQLESGKIR LAQLELDLNR ARSQGLLLGG  300
APGGNCSADA AMFDAEYSRW LDDDSRRMIE LRGGLHAHLP DSDLRAIVDD ALTHYNELFR  360
LKDTTARTDV FHLITGMWAT PAERCFLWIG GFRPSDMLKT LVPQLDPLTE QQVGGICSLR  420
QSLQQAEEAL TQGLEQLHQS LADTVAGSGS LADDTNMGSF LGDMALALGK LSNLENFVIQ  480
ADNLRLQTLH QMHRILTVRQ AARCFLAIGE YHNRLRALSS LWASRPREIM MADEGNCGEL  540
SIAAHPSESQ YAAF*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast05G002900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003576364.10.0transcription factor TGAL4 isoform X1
RefseqXP_014758844.10.0transcription factor TGAL4 isoform X1
RefseqXP_014758845.10.0transcription factor TGAL4 isoform X1
RefseqXP_014758846.10.0transcription factor TGAL4 isoform X1
SwissprotQ53Q700.0TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBLA0A0Q3PJP70.0A0A0Q3PJP7_BRADI; Uncharacterized protein
STRINGBRADI4G26670.30.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44443670
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-137bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]
  3. Miyamoto K, et al.
    Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells.
    J. Plant Physiol., 2015. 173: p. 19-27
    [PMID:25462074]