PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast04G268700.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 171aa    MW: 18425.5 Da    PI: 8.7491
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast04G268700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.45.4e-1264112553
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                         +++rr+++NRe+ArrsR RK+ +++eL+ +++ L a N++L  el++  
  Brast04G268700.1.p  64 RKTRRLASNRESARRSRVRKQRRLDELASRAARLRAANRRLLVELNRVA 112
                         689*****************************************99976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-1060124IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-861116No hitNo description
PROSITE profilePS5021710.72662125IPR004827Basic-leucine zipper domain
PfamPF001706.6E-964112IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.92E-864113No hitNo description
PROSITE patternPS0003606782IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MQRQGAACGI AAYHHSGVFL PRQGYDDPLA DVFASLSDMM APPYGFNGDG DATAGSAPPG  60
GDERKTRRLA SNRESARRSR VRKQRRLDEL ASRAARLRAA NRRLLVELNR VAAEHGRVAR  120
ESARLREEAS ELRRKLDEIG LGMEDETQSA ASASAGSGEA EHLQECAPLA *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17682RRSRVRK
27683RRSRVRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast04G268700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3658604e-78AK365860.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2038F22.
GenBankAK3721474e-78AK372147.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2147D05.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003571050.13e-62ocs element-binding factor 1
TrEMBLI1HY698e-61I1HY69_BRADI; Uncharacterized protein
STRINGBRADI3G06670.11e-61(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP127422735