PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast01G110600.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 342aa    MW: 37420 Da    PI: 9.1728
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast01G110600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.39.3e-15268311548
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                         +r++r++kNRe+A rsR+RK+a++ eLe+kv  Le+eN++Lkk+
  Brast01G110600.1.p 268 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLKKQ 311
                         69***************************************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.1E-12264322IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.7E-15266311No hitNo description
PROSITE profilePS5021711.702266311IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.94E-12268311No hitNo description
CDDcd147072.03E-25268312No hitNo description
PfamPF001704.4E-12268310IPR004827Basic-leucine zipper domain
PROSITE patternPS000360271286IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MGSRKMASQP GRGGGDAGTS QRGQMQNLAR QGSLYSLTLD EVQNHLGEPL QSMNLDELLR  60
TVFPDETDPN GATTSKYEPS AGLLRQGSIT MPSELSKKTV DEVWKGIQDA PKKNVQEGGR  120
RRRERQTTLG EMTLEDFLVK AGVVAEGYLK DLNDVGDGSF VGRGATAAGA TELTSGAQWL  180
DPYQQQIAVS AIESHQHMQQ IMPGAYMHSQ LQLVPQPLNA VPVAPVILDS AYSDSHNTSP  240
MVSPTSDSQT PGRKRGIPGD VPNKFVERRQ KRMIKNRESA ARSRARKQAY TNELENKVSR  300
LEEENERLKK QKYPAVPEPS DLYLGGGRHP HFPLSIVCSK S*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1118125GRRRRERQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast01G110600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014754826.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
RefseqXP_014754827.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
SwissprotQ9LES33e-69AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A0Q3KGN70.0A0A0Q3KGN7_BRADI; Uncharacterized protein
STRINGBRADI2G53060.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27073883
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.16e-67ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]