PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009127148.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Family GRF
Protein Properties Length: 299aa    MW: 32577.5 Da    PI: 8.6482
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009127148.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC76.23.4e-245799244
             WRC  2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44
                     epgrCrRtDGKkWRCs++v++++k+CErHlhrgr rsrk++e
  XP_009127148.1 57 LEPGRCRRTDGKKWRCSKEVVSNHKYCERHLHRGRPRSRKHVE 99
                    69***************************************97 PP

2QLQ51.43.2e-18839233
             QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlq 33
                    +FT+aQl +L++Q+++yKy++a+ PvP +Ll+
  XP_009127148.1  8 PFTNAQLKELERQAMIYKYMIASIPVPFDLLV 39
                    9*****************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009511.1E-10743IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166618.186843IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088802.8E-11838IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166723.62956100IPR014977WRC domain
PfamPF088791.3E-195899IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010114Biological Processresponse to red light
GO:0010218Biological Processresponse to far red light
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MGCYYYYPFT NAQLKELERQ AMIYKYMIAS IPVPFDLLVS SSSYAPPCNN KNAVGDLEPG  60
RCRRTDGKKW RCSKEVVSNH KYCERHLHRG RPRSRKHVEL PYSRPINIGG GSEKNRVLSS  120
IKDTTVVEPK EVSSALANYR GLEIFPASAS NEQENKYLNF IDVWSDGVRS SEKQSTPASS  180
SPNGNPSLYS LDLSMGGNSL MGHDEMGLRV IGPGRDDPHG YGPYGGVVSS SLDEMSRWLA  240
STSATPGGPL AEILRPNPSS AFSGEMEGNS LTATPTPSSS PSRVVKKVTG SVSDDSSKI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009127148.10.0PREDICTED: growth-regulating factor 7 isoform X2
RefseqXP_009127147.10.0PREDICTED: growth-regulating factor 7 isoform X1
SwissprotQ9FJB81e-153GRF7_ARATH; Growth-regulating factor 7
TrEMBLM4E1L70.0M4E1L7_BRARP; Uncharacterized protein
STRINGBra022667.1-P0.0(Brassica rapa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53660.11e-134growth-regulating factor 7