PlantTFDB
Plant Transcription Factor Database
PlantRegMap/PlantTFDB v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009106436.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Family bZIP
Protein Properties Length: 374aa    MW: 42872.1 Da    PI: 6.1418
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009106436.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.87.5e-1197139450
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                     +k  rr+++NReAAr+sR+RKka++++Lee   +L++  ++L    e
  XP_009106436.1  97 DKMKRRLAQNREAARKSRLRKKAYVQQLEESRLKLSQLEQEL----E 139
                     6899**************************888888777544....3 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-589152IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.3E-896141No hitNo description
PROSITE profilePS502179.38196140IPR004827Basic-leucine zipper domain
PfamPF001701.5E-797138IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.04E-698140No hitNo description
PROSITE patternPS000360101116IPR004827Basic-leucine zipper domain
PfamPF141443.1E-30180254IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MMSSFSPTQL ASLRDMGIYE PFQQLVSWGN VYKSDINDHS PNTASSSVIQ VDARVDDHNN  60
IVKSNYNSSH NQIEAEPCSN DHQDVDDDDD DDGRIHDKMK RRLAQNREAA RKSRLRKKAY  120
VQQLEESRLK LSQLEQELER AKQQGLRVSN SIPSGSITNT RIATFEMEHS HWLEEQSRRV  180
SELRIALQAH ISDIELRMLV ESCLNHYANL FRMKSDAAKA DVFYLISGMW RTCTERFFQW  240
IGGFRPSELL NVVMPYLQPL TDQQVLEVRN LQQSSQQAED ALSQGIEKLQ QSLVENIVVD  300
AFSMDYPPQM AAALENLQAL EGFVNQADHL RQQTLQQMAK ILTTRQSARG LLALGEYLHR  360
LRALSSLWAA RPRD
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00247DAPTransfer from AT1G77920Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_009106436.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009106436.10.0PREDICTED: transcription factor TGA7
SwissprotQ93ZE20.0TGA7_ARATH; Transcription factor TGA7
TrEMBLA0A0D3D1G40.0A0A0D3D1G4_BRAOL; Uncharacterized protein
TrEMBLA0A3P6H3T00.0A0A3P6H3T0_BRAOL; Uncharacterized protein
STRINGBo6g121590.10.0(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM30612766
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77920.10.0bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]