PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_013592019.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Family ERF
Protein Properties Length: 302aa    MW: 33552.3 Da    PI: 4.7749
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_013592019.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.21.1e-14107154253
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                     +  GVr++k +g+W+AeIr+p     +  r +lg+f t+e A++a+   rk++
  XP_013592019.1 107 KPVGVRQRK-WGKWAAEIRHPI----TkNRTWLGTFETEEAAHQAYKDKRKEY 154
                     789*****9.**********73....359*********99*******999998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381232.1E-405266IPR017392AP2/ERF transcription factor ERF/PTI6
CDDcd000189.36E-18106147No hitNo description
SMARTSM003801.8E-12107167IPR001471AP2/ERF domain
PROSITE profilePS5103216.779107164IPR001471AP2/ERF domain
PfamPF008475.8E-9107155IPR001471AP2/ERF domain
PRINTSPR003671.2E-5108119IPR001471AP2/ERF domain
SuperFamilySSF541713.4E-14109159IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.2E-18110149IPR001471AP2/ERF domain
PRINTSPR003671.2E-5130146IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MVGIREQLSL SSTKKPKRCN PQEKTQQSLR KVRILVNDPY ATDDSSSDEG ETKMRRIVRV  60
VNFPPLVESA AAPRVEPTSV SSSQDSTKTT SKKAAAAGAS RPRLSKKPVG VRQRKWGKWA  120
AEIRHPITKN RTWLGTFETE EAAHQAYKDK RKEYDALLAT SNDSASVSET SQCSRSSPLE  180
QDTSASTPAL KEEIKITTTT AGVDSSSKEV LFGFNFAELP IPDLGFFAEE GQMVGDLGFF  240
TEDHDQLNLD CLFTDDQFDD FSMLGFEDSG PSELPDWDFP DVEFESSFFF ADQHIPLKSF  300
VA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013592018.10.0PREDICTED: ethylene-responsive transcription factor ERF118
RefseqXP_013592019.10.0PREDICTED: ethylene-responsive transcription factor ERF118
RefseqXP_013592020.10.0PREDICTED: ethylene-responsive transcription factor ERF118
SwissprotQ9CA277e-82EF118_ARATH; Ethylene-responsive transcription factor ERF118
TrEMBLA0A0D3CYZ80.0A0A0D3CYZ8_BRAOL; Uncharacterized protein
STRINGBra004318.1-P0.0(Brassica rapa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.22e-75ERF family protein