PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi1g61477.1.p
Common NameBRADI_1g61477, LOC100841096
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family GeBP
Protein Properties Length: 355aa    MW: 38604.3 Da    PI: 5.0653
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi1g61477.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573106.71.8e-3368167297
            DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkife 90 
                       lfqrlw+eeDeiv+L+++ +f+a++g+   +++ d++ fye +++++++++sksql eK+rrLK+K++++v++ + sg +++f+++h+q +fe
  Bradi1g61477.1.p  68 LFQRLWTEEDEIVILRAFAEFTAQRGTafASHQyDTEPFYEEMRRRLQLDFSKSQLAEKLRRLKRKYRNCVERlRGSGASFTFRSPHEQAVFE 160
                       79*************************9977778***************************************8889**************** PP

            DUF573  91 lskkiWg 97 
                       +++ iW+
  Bradi1g61477.1.p 161 IARNIWR 167
                       ******8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.7E-3069166IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MLPMVDDPSA AAGAAASSSF PDADAYGNGD SEDIDFPVDP IPNPPFSSSA TVPAPASAAA  60
AVGERRPLFQ RLWTEEDEIV ILRAFAEFTA QRGTAFASHQ YDTEPFYEEM RRRLQLDFSK  120
SQLAEKLRRL KRKYRNCVER LRGSGASFTF RSPHEQAVFE IARNIWRPSS DKHGRDPSAG  180
DSDDDATVTA TNAGANGDAK SPSSSRAQRR VRRRRTADCT ADATEVPQPY TPSTMPVKTE  240
ESLPAFFPQV SMDGAEHVVP PAAQPAANTE SSVLTPLFKE MVRAMLGMGG CPSPLGLGAK  300
VPEPPSAILG IPMEGEKWRQ QRILELEVYL RRIDLLQDEV KSALEELKAT PAAT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi1g61477.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010228580.10.0probable transcription factor At3g04930
TrEMBLI1H5500.0I1H550_BRADI; Uncharacterized protein
STRINGBRADI1G61477.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97437123
Representative plantOGRP31841028
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.23e-34DNA-binding storekeeper protein-related transcriptional regulator