PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi1g20210.1.p
Common NameBRADI_1g20210, LOC100825486
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family GeBP
Protein Properties Length: 414aa    MW: 44544.1 Da    PI: 6.4181
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi1g20210.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF5731124e-35112210297
            DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifel 91 
                       lfqrlw+eeDeiv+L+G+ +f+a +g+   +++ d+d fye +++++++++sksqlveK+rrLK+K++++v++ +sg  +sf+++h+q ife+
  Bradi1g20210.1.p 112 LFQRLWTEEDEIVILRGFAEFTAARGTafASHQyDTDPFYEDMRRRLQLDFSKSQLVEKLRRLKRKYRNCVSRLRSGGTFSFRSPHEQAIFEI 204
                       79************************99877778*********************************************************** PP

            DUF573  92 skkiWg 97 
                       ++ iW+
  Bradi1g20210.1.p 205 ARTIWH 210
                       *****7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.0E-31113210IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
MQIQAPSIPI PRIPASRNPN PSQIPSPAPM LPAGDGPSAA VAAISFPDAD GDGYSEDGDF  60
TDAQFLEPPD PGLLDPTSSS ATALLPAAGS AGGSGGGGGG LASSGGGERR PLFQRLWTEE  120
DEIVILRGFA EFTAARGTAF ASHQYDTDPF YEDMRRRLQL DFSKSQLVEK LRRLKRKYRN  180
CVSRLRSGGT FSFRSPHEQA IFEIARTIWH HTTNKHGRDP SADSDDEEAA VAAAAAVAAT  240
AAPANNTSPN GEVKSPSGRQ RRRRRSSEYA TPTTPAATIL VQPPQPVQVP VSVPVKMDGS  300
LPALQQTPMP VTVTMEGSEP HRFPVTSPQS GVFDAEKNCL MPLFKEMIHA VINIGSNPFG  360
AKLPEPPLRL PMEGERWRNQ RILELEVYLK RIELLQEQVK ATLEELKSSA PGT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi1g20210.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014755634.10.0probable transcription factor At5g28040
TrEMBLA0A0Q3ND730.0A0A0Q3ND73_BRADI; Uncharacterized protein
STRINGBRADI1G20210.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97437123
Representative plantOGRP31841028
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.22e-36DNA-binding storekeeper protein-related transcriptional regulator