PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT5G60830.1
Common NameAtbZIP70, bZIP70
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family bZIP
Protein Properties Length: 206aa    MW: 23914.7 Da    PI: 6.9174
Description basic leucine-zipper 70
Gene Model
Gene Model ID Type Source Coding Sequence
AT5G60830.1genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1452.4e-1469129363
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  e +r+rr+ +NRe+ArrsR RKk++ieeL++ v++L   N+ L +++ +l +   +  +e+
  AT5G60830.1  69 EERRARRMVSNRESARRSRMRKKKQIEELQQQVEQLMMLNHHLSEKVINLLESNHQILQEN 129
                  678*******************************************999999988888887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-1467131IPR004827Basic-leucine zipper domain
PfamPF001701.2E-1269129IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.35869132IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.44E-1171123No hitNo description
Gene3DG3DSA:1.20.5.1703.9E-1271127No hitNo description
CDDcd147023.37E-1772123No hitNo description
PROSITE patternPS0003607489IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MESSSVHRSH CFDILDGVPL HDDHFNSAFL PNTDFNVHLQ SNVSTRINNQ SHLDPNAENI  60
FHNEGLAPEE RRARRMVSNR ESARRSRMRK KKQIEELQQQ VEQLMMLNHH LSEKVINLLE  120
SNHQILQENS QLKEKVSSFH LLMADVLLPM RNAESNINDR NVNYLRGEPS NRPTNSPFAS  180
STMIDAMYAT SDYYSSNYLL AFVCRY
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO184244010.0
Expression AtlasAT5G60830-
AtGenExpressAT5G60830-
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT5G60830.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT5G60830
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0026880.0CP002688.1 Arabidopsis thaliana chromosome 5 sequence.
GenBankAB0154720.0AB015472.1 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAE1.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_200891.11e-151basic leucine-zipper 70
TrEMBLF4K0H91e-151F4K0H9_ARATH; Basic leucine-zipper 70
STRINGAT5G60830.11e-151(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM61852545
Representative plantOGRP1181045
Publications ? help Back to Top
  1. Riechmann JL, et al.
    Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
    Science, 2000. 290(5499): p. 2105-10
    [PMID:11118137]
  2. Jakoby M, et al.
    bZIP transcription factors in Arabidopsis.
    Trends Plant Sci., 2002. 7(3): p. 106-11
    [PMID:11906833]
  3. Deppmann CD, et al.
    Dimerization specificity of all 67 B-ZIP motifs in Arabidopsis thaliana: a comparison to Homo sapiens B-ZIP motifs.
    Nucleic Acids Res., 2004. 32(11): p. 3435-45
    [PMID:15226410]
  4. Gao M,Li G,McCombie WR,Quiros CF
    Comparative analysis of a transposon-rich Brassica oleracea BAC clone with its corresponding sequence in A. thaliana.
    Theor. Appl. Genet., 2005. 111(5): p. 949-55
    [PMID:16044267]
  5. Ehlert A, et al.
    Two-hybrid protein-protein interaction analysis in Arabidopsis protoplasts: establishment of a heterodimerization map of group C and group S bZIP transcription factors.
    Plant J., 2006. 46(5): p. 890-900
    [PMID:16709202]
  6. Deppmann CD,Alvania RS,Taparowsky EJ
    Cross-species annotation of basic leucine zipper factor interactions: Insight into the evolution of closed interaction networks.
    Mol. Biol. Evol., 2006. 23(8): p. 1480-92
    [PMID:16731568]
  7. Efroni I, et al.
    Regulation of leaf maturation by chromatin-mediated modulation of cytokinin responses.
    Dev. Cell, 2013. 24(4): p. 438-45
    [PMID:23449474]