PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT5G14490.1
Common Nameanac085, F18O22_280, NAC085
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family NAC
Protein Properties Length: 350aa    MW: 38735.6 Da    PI: 6.7874
Description NAC domain containing protein 85
Gene Model
Gene Model ID Type Source Coding Sequence
AT5G14490.1genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM102.94.3e-32581991128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.....vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atk......s 80 
                  lp+G++F+Ptdee++ e+L++k+  +       +   +     v ++v+i++++P++Lp  v+++ ++++fF k++++y++g+rk+r +t       +
  AT5G14490.1  58 LPKGVKFEPTDEEVI-EHLEAKCGIDGlkphllI---QdficsVTQDVGINYTHPQNLP-GVSKDGTSVFFFNKTAHAYQNGQRKRRrITPtslkddT 150
                  799************.99****877775566552...03444478999***********.66778899*******************44334455557 PP

          NAM  81 gyWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128
                   +W++tg++k+v+  +g ++g+kk++v+yk   +  k+ek++Wv+h+y+l
  AT5G14490.1 151 VRWHKTGQTKPVML-NGIQKGCKKIMVLYKSarKGFKPEKSNWVLHQYHL 199
                  88************.99************6422555778*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.41E-3743217IPR003441NAC domain
PROSITE profilePS5100530.03958217IPR003441NAC domain
PfamPF023656.2E-1359199IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007275Biological Processmulticellular organism development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MKTLHRTWIV DGPWISRNVK NASLSSALQI KDCGAYINCF NCSYRIDNSN VLTPWPGLPK  60
GVKFEPTDEE VIEHLEAKCG IDGLKPHLLI QDFICSVTQD VGINYTHPQN LPGVSKDGTS  120
VFFFNKTAHA YQNGQRKRRR ITPTSLKDDT VRWHKTGQTK PVMLNGIQKG CKKIMVLYKS  180
ARKGFKPEKS NWVLHQYHLG TEEGEIGEYV VSKITYQQPK QQEKTIDESE SSGVRGGPST  240
PKTSTITQVR PVISVDEDEI AFDDDSKMVL DSYAEGLENI QEASSGSTSD KIAKVGGNVS  300
VIEDNLMSKK IEASSIPNHG NVDYGSGNFS VSDLENAELG TLPDLLSVRT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135139RKRRR
2136140KRRRI
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO184173930.0
Expression AtlasAT5G14490-
AtGenExpressAT5G14490-
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT5G14490.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT5G14490
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0026880.0CP002688.1 Arabidopsis thaliana chromosome 5 sequence.
GenBankAL1638170.0AL163817.1 Arabidopsis thaliana DNA chromosome 5, BAC clone F18O22 (ESSA project).
GenBankAL1637920.0AL163792.1 Arabidopsis thaliana DNA chromosome 5, BAC clone T15N1 (ESSA project).
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_196953.10.0NAC domain containing protein 85
SwissprotQ6NQK25e-73NAC8_ARATH; NAC domain-containing protein 8
TrEMBLQ9LY800.0Q9LY80_ARATH; NAC domain containing protein 85
STRINGAT5G14490.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM50452651
Representative plantOGRP5251585
Publications ? help Back to Top
  1. Riechmann JL, et al.
    Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
    Science, 2000. 290(5499): p. 2105-10
    [PMID:11118137]
  2. Ooka H, et al.
    Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana.
    DNA Res., 2003. 10(6): p. 239-47
    [PMID:15029955]