PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT4G01520.1
Common Nameanac067, F11O4.3, NAC067
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family NAC
Protein Properties Length: 302aa    MW: 34507.1 Da    PI: 5.5695
Description NAC domain containing protein 67
Gene Model
Gene Model ID Type Source Coding Sequence
AT4G01520.1genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM128.45.4e-4051362128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykveP.wdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                  p G+rF+Pt ee++++yLk+k+ gk+  ++e+i+e++i++++P +dLpk  ++++e+ ewyfFs+ + +++++ + +r+t sg+Wk +g d+++ +k 
  AT4G01520.1   5 PTGYRFSPTGEEVINHYLKNKILGKTWLVDEAISEINILNHKPsKDLPKlaRIQSEDLEWYFFSPIEYTNPNKMKMKRTTGSGFWKPSGVDRKIRDKr 102
                  78************************999999***********558995458888888**************************************97 PP

          NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                   +g ++g+kktLv+++g++p+g++t Wvmhey++
  AT4G01520.1 103 gNGVVIGIKKTLVYHEGKSPHGVRTPWVMHEYHI 136
                  77888***************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.07E-443154IPR003441NAC domain
PROSITE profilePS5100545.9194154IPR003441NAC domain
PfamPF023656.5E-235136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007275Biological Processmulticellular organism development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MMKDPTGYRF SPTGEEVINH YLKNKILGKT WLVDEAISEI NILNHKPSKD LPKLARIQSE  60
DLEWYFFSPI EYTNPNKMKM KRTTGSGFWK PSGVDRKIRD KRGNGVVIGI KKTLVYHEGK  120
SPHGVRTPWV MHEYHITCLP HHKRKYVVCQ VKYKGEAAEI SYEPSPSLVS DSHTVIAING  180
EPEPELQVEQ PGKENLLGMS VDDLIEPMNQ QEEPQGPHLA PNDDEFIRGL RHVDREPVEY  240
LFANEENMDG LSIMNDLTIP MIAQQEDLIL SEWEGFIAAT FFSDNNNNNN LNVHQLTSFL  300
PG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-27513616140Stress-induced transcription factor NAC1
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO184116580.0
Expression AtlasAT4G01520-
AtGenExpressAT4G01520-
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT4G01520.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT4G01520
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB4936710.0AB493671.1 Arabidopsis thaliana At4g01540 mRNA for hypothetical protein, partial cds, clone: RAAt4g01540.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_192061.10.0NAC domain containing protein 67
SwissprotA8MQY10.0NAC68_ARATH; NAC domain-containing protein 68
TrEMBLO825930.0O82593_ARATH; F11O4.3
STRINGAT4G01520.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19821971
Publications ? help Back to Top
  1. Riechmann JL, et al.
    Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
    Science, 2000. 290(5499): p. 2105-10
    [PMID:11118137]
  2. Ooka H, et al.
    Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana.
    DNA Res., 2003. 10(6): p. 239-47
    [PMID:15029955]
  3. Kim YS, et al.
    A membrane-bound NAC transcription factor regulates cell division in Arabidopsis.
    Plant Cell, 2006. 18(11): p. 3132-44
    [PMID:17098812]