PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT3G01600.1
Common Nameanac044, F4P13.14, NAC044
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family NAC
Protein Properties Length: 370aa    MW: 40827.2 Da    PI: 5.4979
Description NAC domain containing protein 44
Gene Model
Gene Model ID Type Source Coding Sequence
AT3G01600.1genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM99.64.5e-31551961128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.....vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.......tks 80 
                  lp+G++F+Ptde+++ e+L++k+          +   e     v ++v+i++++P++Lp  ++++  +++fF+k+ ++y tg+rk+r+        + 
  AT3G01600.1  55 LPKGVKFEPTDEDII-EFLEAKCGIGGsephvlI---EefirpVTEDVGINYTHPQNLP-GANKDGVSVFFFHKTVQAYGTGQRKRRKitptlvnDEP 147
                  799************.9*****876664566552...13445467889***********.445566799******************74555554337 PP

          NAM  81 gyWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128
                   +W++tg++k+v+  +g + g+kk++v+yk   +  k+ek++Wv+h+y+l
  AT3G01600.1 148 VRWHKTGRTKPVML-SGVQRGCKKIMVLYKSarKGTKPEKSNWVLHQYHL 196
                  88************.999***********5432566777*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.49E-3640214IPR003441NAC domain
PROSITE profilePS5100529.40955214IPR003441NAC domain
PfamPF023657.1E-1356196IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007275Biological Processmulticellular organism development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MARAWIVDGR GIAAKVKNAS LSSALQIQDC GAHIKCPNCT YRIDNSNVLI PWPGLPKGVK  60
FEPTDEDIIE FLEAKCGIGG SEPHVLIEEF IRPVTEDVGI NYTHPQNLPG ANKDGVSVFF  120
FHKTVQAYGT GQRKRRKITP TLVNDEPVRW HKTGRTKPVM LSGVQRGCKK IMVLYKSARK  180
GTKPEKSNWV LHQYHLGTEG KEIGDYVVSK ITYQQQKLGE NPDEGESSSG VRGGPTTPKT  240
NTPTPPSLVD GVAGDEEAFD DLKMFDPFFE ELDSIPEAAL GKMWSKKARM DEEFVVNLSE  300
DNLICDESME ASSLWENQVL PNPSLGTVGD FDGFSISDLE NADLGTPPDF LTVRSCLKKT  360
LFTFGKFNGT
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
At.501460.0seed
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO1865096660.0
Expression AtlasAT3G01600-
AtGenExpressAT3G01600-
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT3G01600.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT3G01600
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankATAC0093250.0AC009325.8 Arabidopsis thaliana chromosome III BAC F4P13 genomic sequence, complete sequence.
GenBankCP0026860.0CP002686.1 Arabidopsis thaliana chromosome 3, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_186809.10.0NAC domain containing protein 44
SwissprotQ6NQK23e-74NAC8_ARATH; NAC domain-containing protein 8
TrEMBLQ9SS950.0Q9SS95_ARATH; F4P13.14 protein
STRINGAT3G01600.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5251585
MalvidsOGEM50452651
Publications ? help Back to Top
  1. Riechmann JL, et al.
    Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
    Science, 2000. 290(5499): p. 2105-10
    [PMID:11118137]
  2. Ooka H, et al.
    Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana.
    DNA Res., 2003. 10(6): p. 239-47
    [PMID:15029955]