PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT2G41835.1
Common NameSAP11, T11A7.20
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family C2H2
Protein Properties Length: 279aa    MW: 31252.4 Da    PI: 8.5806
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AT2G41835.1genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.10.00029214236223
                  EETTTTEEESSHHHHHHHHHH.T CS
      zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                  +Cp Cg  Fs+  +L+ H  + H
  AT2G41835.1 214 VCPQCGAKFSSVTSLVEHVEKtH 236
                  6*****************99888 PP

2zf-C2H218.45.9e-06251273223
                  EETTTTEEESSHHHHHHHHHH.T CS
      zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                  +Cp C++ F+++ +L++Hi + H
  AT2G41835.1 251 VCPRCSRGFRDPVDLVNHIERdH 273
                  7******************9988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1183105.49E-12457No hitNo description
PROSITE profilePS510397.821056IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.101.1E-101152IPR000058Zinc finger, AN1-type
SMARTSM001548.1E-71352IPR000058Zinc finger, AN1-type
PfamPF014282.9E-131349IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.103.7E-991142IPR000058Zinc finger, AN1-type
SuperFamilySSF1183101.57E-893142No hitNo description
PROSITE profilePS510398.13298147IPR000058Zinc finger, AN1-type
SMARTSM001540.017101142IPR000058Zinc finger, AN1-type
PfamPF014288.2E-8101140IPR000058Zinc finger, AN1-type
SMARTSM003550.01213236IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.45213241IPR007087Zinc finger, C2H2
PfamPF056051.1E-6215274IPR008598Drought induced 19 protein type, zinc-binding domain
PROSITE patternPS000280215236IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.603.2E-4217236IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM0035513250273IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.871250278IPR007087Zinc finger, C2H2
PROSITE patternPS000280252273IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008150Biological Processbiological_process
GO:0003676Molecular Functionnucleic acid binding
GO:0008270Molecular Functionzinc ion binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000293anatomyguard cell
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MGTPEFPDLG KHCSVDVCKQ IDFLPFTCDR CLQVFCLDHR SYMKHSCPKG DREDVTVVIC  60
PLCAKGVRLN PNEDPNITWE KHVNTDCDPS NYEKATKKKK CPVPRCKEYL TFSNTIKCRD  120
CNVDHCLKHR FGPDHTCPGP RKLPFMGFLS SSTTRKEAKT TRPNKAHPST SSSSSSSRWS  180
NLLSSAEAGI SRLGNDISQK LQFSSSKDNG IVEVCPQCGA KFSSVTSLVE HVEKTHERNK  240
KQNHGNVTVD VCPRCSRGFR DPVDLVNHIE RDHRGTSKA
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasAT2G41835
AtGenExpressAT2G41835
Functional Description ? help Back to Top
Source Description
UniProtMay be involved in environmental stress response. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00306DAP27203113Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT2G41835.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT2G41835
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY0966200.0AY096620.1 Arabidopsis thaliana unknown protein (At2g41835) mRNA, complete cds.
GenBankAY0652720.0AY065272.1 Arabidopsis thaliana unknown protein (At2g41835) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_850358.10.0zinc finger (C2H2 type, AN1-like) family protein
SwissprotQ8VZ420.0SAP11_ARATH; Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11
TrEMBLD7LHY70.0D7LHY7_ARALL; Putative uncharacterized protein
STRINGAT2G41835.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP19091520
MalvidsOGEM39082754
Publications ? help Back to Top
  1. Yamada K, et al.
    Empirical analysis of transcriptional activity in the Arabidopsis genome.
    Science, 2003. 302(5646): p. 842-6
    [PMID:14593172]
  2. Vij S,Tyagi AK
    Genome-wide analysis of the stress associated protein (SAP) gene family containing A20/AN1 zinc-finger(s) in rice and their phylogenetic relationship with Arabidopsis.
    Mol. Genet. Genomics, 2006. 276(6): p. 565-75
    [PMID:17033811]