PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT1G44830.1
Common NameERF014, T12C22.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family ERF
Protein Properties Length: 211aa    MW: 23039.4 Da    PI: 5.2437
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AT1G44830.1genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-183383155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  AT1G44830.1 33 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 83
                 59*****998.**********9...336************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.08E-173393No hitNo description
Gene3DG3DSA:3.30.730.105.5E-293493IPR001471AP2/ERF domain
PfamPF008471.7E-113483IPR001471AP2/ERF domain
SMARTSM003802.0E-323498IPR001471AP2/ERF domain
PROSITE profilePS5103221.7593492IPR001471AP2/ERF domain
SuperFamilySSF541713.99E-183492IPR016177DNA-binding domain
PRINTSPR003674.7E-93546IPR001471AP2/ERF domain
PRINTSPR003674.7E-95773IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009861Biological Processjasmonic acid and ethylene-dependent systemic resistance
GO:0009863Biological Processsalicylic acid mediated signaling pathway
GO:0009873Biological Processethylene-activated signaling pathway
GO:0045088Biological Processregulation of innate immune response
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:1900030Biological Processregulation of pectin biosynthetic process
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000013anatomycauline leaf
PO:0000026anatomyprimary root tip
PO:0000037anatomyshoot apex
PO:0000230anatomyinflorescence meristem
PO:0003015anatomyprimary root differentiation zone
PO:0003022anatomylateral root cap of primary root
PO:0005679anatomyepidermis
PO:0008019anatomyleaf lamina base
PO:0009005anatomyroot
PO:0009009anatomyplant embryo
PO:0009010anatomyseed
PO:0009025anatomyvascular leaf
PO:0009031anatomysepal
PO:0009032anatomypetal
PO:0009046anatomyflower
PO:0009052anatomyflower pedicel
PO:0020038anatomypetiole
PO:0020100anatomyhypocotyl
PO:0020137anatomyleaf apex
PO:0025022anatomycollective leaf structure
PO:0025257anatomyprimary root elongation zone
PO:0001054developmental stagevascular leaf senescent stage
PO:0001078developmental stageplant embryo cotyledonary stage
PO:0004507developmental stageplant embryo bilateral stage
PO:0007064developmental stageLP.12 twelve leaves visible stage
PO:0007098developmental stageLP.02 two leaves visible stage
PO:0007103developmental stageLP.10 ten leaves visible stage
PO:0007115developmental stageLP.04 four leaves visible stage
PO:0007123developmental stageLP.06 six leaves visible stage
PO:0007611developmental stagepetal differentiation and expansion stage
PO:0007616developmental stageflowering stage
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MVKTLQKTPK RMSSPSSSSS SSSSTSSSSI RMKKYKGVRM RSWGSWVSEI RAPNQKTRIW  60
LGSYSTAEAA ARAYDAALLC LKGSSANNLN FPEISTSLYH IINNGDNNND MSPKSIQRVA  120
AAAAAANTDP SSSSVSTSSP LLSSPSEDLY DVVSMSQYDQ QVSLSESSSW YNCFDGDDQF  180
MFINGVSAPY LTTSLSDDFF EEGDIRLWNF C
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-1334931473Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO1453364620.0
Genevisible261327_at0.0
Expression AtlasAT1G44830-
AtGenExpressAT1G44830-
ATTED-IIAT1G44830-
Functional Description ? help Back to Top
Source Description
TAIRencodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Function -- GeneRIF ? help Back to Top
  1. Overexpression of the ERF gene coordinately activates the pectin biosynthetic pathway genes and increases the content of pectin.
    [PMID: 22160296]
  2. Data demonstrates that AtERF014 acts as a dual regulator that differentially modulates immunity against Pst and Bc in Arabidopsis. [AtERF014]
    [PMID: 27445230]
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00185DAP27203113Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT1G44830.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT1G44830
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY5608390.0AY560839.1 Arabidopsis thaliana putative AP2/EREBP transcription factor (At1g44830) mRNA, complete cds.
GenBankBT0252700.0BT025270.1 Arabidopsis thaliana At1g44830 mRNA, complete cds.
GenBankCP0026840.0CP002684.1 Arabidopsis thaliana chromosome 1 sequence.
GenBankT12C220.0AC020576.2 Sequence of BAC T12C22 from Arabidopsis thaliana chromosome 1, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_175104.11e-152Integrase-type DNA-binding superfamily protein
SwissprotQ9LPE81e-153ERF14_ARATH; Ethylene-responsive transcription factor ERF014
TrEMBLA0A178WK181e-151A0A178WK18_ARATH; Uncharacterized protein
STRINGAT1G44830.11e-152(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM144091822
Representative plantOGRP6161718
Publications ? help Back to Top
  1. Riechmann JL, et al.
    Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
    Science, 2000. 290(5499): p. 2105-10
    [PMID:11118137]
  2. Dal Bosco C, et al.
    Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana.
    J. Biol. Chem., 2004. 279(2): p. 1060-9
    [PMID:14576160]
  3. Ko JH,Han KH,Park S,Yang J
    Plant body weight-induced secondary growth in Arabidopsis and its transcription phenotype revealed by whole-transcriptome profiling.
    Plant Physiol., 2004. 135(2): p. 1069-83
    [PMID:15194820]
  4. Guan Y,Nothnagel EA
    Binding of arabinogalactan proteins by Yariv phenylglycoside triggers wound-like responses in Arabidopsis cell cultures.
    Plant Physiol., 2004. 135(3): p. 1346-66
    [PMID:15235117]
  5. Nakano T,Suzuki K,Fujimura T,Shinshi H
    Genome-wide analysis of the ERF gene family in Arabidopsis and rice.
    Plant Physiol., 2006. 140(2): p. 411-32
    [PMID:16407444]
  6. Ma S,Gong Q,Bohnert HJ
    Dissecting salt stress pathways.
    J. Exp. Bot., 2006. 57(5): p. 1097-107
    [PMID:16510518]
  7. Lee JY, et al.
    Transcriptional and posttranscriptional regulation of transcription factor expression in Arabidopsis roots.
    Proc. Natl. Acad. Sci. U.S.A., 2006. 103(15): p. 6055-60
    [PMID:16581911]
  8. Brodersen P, et al.
    Arabidopsis MAP kinase 4 regulates salicylic acid- and jasmonic acid/ethylene-dependent responses via EDS1 and PAD4.
    Plant J., 2006. 47(4): p. 532-46
    [PMID:16813576]
  9. Mace DL, et al.
    Quantification of transcription factor expression from Arabidopsis images.
    Bioinformatics, 2006. 22(14): p. e323-31
    [PMID:16873489]
  10. Jiang Y,Deyholos MK
    Comprehensive transcriptional profiling of NaCl-stressed Arabidopsis roots reveals novel classes of responsive genes.
    BMC Plant Biol., 2006. 6: p. 25
    [PMID:17038189]
  11. Culligan KM,Robertson CE,Foreman J,Doerner P,Britt AB
    ATR and ATM play both distinct and additive roles in response to ionizing radiation.
    Plant J., 2006. 48(6): p. 947-61
    [PMID:17227549]
  12. Nakano T, et al.
    Increase in pectin deposition by overexpression of an ERF gene in cultured cells of Arabidopsis thaliana.
    Biotechnol. Lett., 2012. 34(4): p. 763-9
    [PMID:22160296]
  13. Zhang H,Hong Y,Huang L,Li D,Song F
    Arabidopsis AtERF014 acts as a dual regulator that differentially modulates immunity against Pseudomonas syringae pv. tomato and Botrytis cinerea.
    Sci Rep, 2016. 6: p. 30251
    [PMID:27445230]