PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT1G33760.1
Common NameERF022, F14M2.12
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family ERF
Protein Properties Length: 184aa    MW: 21086.4 Da    PI: 4.911
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AT1G33760.1genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.73.3e-192068355
          AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 y+G+r++k +g+Wv+eIr+p   gk++r++lg++ tae+Aa+a++aa++ l+g
  AT1G33760.1 20 YRGIRRRK-WGKWVSEIREP---GKKTRIWLGSYETAEMAAAAYDAAALHLRG 68
                 9****998.**********8...557*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.2351976IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.8E-311977IPR001471AP2/ERF domain
SMARTSM003801.7E-341982IPR001471AP2/ERF domain
CDDcd000181.14E-172078No hitNo description
SuperFamilySSF541717.85E-222077IPR016177DNA-binding domain
PRINTSPR003673.7E-102031IPR001471AP2/ERF domain
PfamPF008478.0E-132068IPR001471AP2/ERF domain
PRINTSPR003673.7E-104258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009873Biological Processethylene-activated signaling pathway
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000013anatomycauline leaf
PO:0000293anatomyguard cell
PO:0009010anatomyseed
PO:0009025anatomyvascular leaf
PO:0020030anatomycotyledon
PO:0025022anatomycollective leaf structure
PO:0007064developmental stageLP.12 twelve leaves visible stage
PO:0007095developmental stageLP.08 eight leaves visible stage
PO:0007103developmental stageLP.10 ten leaves visible stage
PO:0007115developmental stageLP.04 four leaves visible stage
PO:0007123developmental stageLP.06 six leaves visible stage
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MENTYVGQRD YRFNVNQLSY RGIRRRKWGK WVSEIREPGK KTRIWLGSYE TAEMAAAAYD  60
AAALHLRGRG TNLNFPELVD SFPRPESSSS EHIQAAAQDA ALMFKPGRLS EPALESGQGL  120
SRVGLSPDQI QAINESPLDS PRMGWMQDLE VADYEELYGQ FFGQHDRDEF FEMQQFQSIW  180
NSNN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-162081668ATERF1
3gcc_A1e-162081668ATERF1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
At.398780.0root| seed
Expression -- Microarray ? help Back to Top
Source ID E-value
Genevisible261984_at0.0
Expression AtlasAT1G33760-
AtGenExpressAT1G33760-
ATTED-IIAT1G33760-
Functional Description ? help Back to Top
Source Description
TAIRencodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Function -- GeneRIF ? help Back to Top
  1. ERF022 controls the genes that are involved in the biosynthesis (ACS7) and signalling (ERF1, ETR1) of ethylene and indicate that ERF022 is a new regulatory element in ethylene-related responses that negatively control the ethylene content and perception.
    [PMID: 25534944]
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT1G33760.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Regulation -- ATRM (Manually Curated Upstream Regulators) ? help Back to Top
Source Upstream Regulator (A: Activate/R: Repress)
ATRM AT1G32640 (R)
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT1G33760
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC0101640.0AC010164.2 Arabidopsis thaliana chromosome I BAC F14M2 genomic sequence, complete sequence.
GenBankAY5608380.0AY560838.1 Arabidopsis thaliana putative AP2/EREBP transcription factor (At1g33760) mRNA, complete cds.
GenBankBT0159280.0BT015928.1 Arabidopsis thaliana At1g33760 mRNA, complete cds.
GenBankBT0205660.0BT020566.1 Arabidopsis thaliana At1g33760 gene, complete cds.
GenBankCP0026840.0CP002684.1 Arabidopsis thaliana chromosome 1 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_174636.11e-135Integrase-type DNA-binding superfamily protein
SwissprotQ9LQ281e-136ERF22_ARATH; Ethylene-responsive transcription factor ERF022
TrEMBLA0A178WIE81e-133A0A178WIE8_ARATH; Uncharacterized protein
STRINGAT1G33760.11e-135(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Representative plantOGRP6161718
Publications ? help Back to Top
  1. Riechmann JL, et al.
    Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
    Science, 2000. 290(5499): p. 2105-10
    [PMID:11118137]
  2. Czechowski T,Bari RP,Stitt M,Scheible WR,Udvardi MK
    Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: unprecedented sensitivity reveals novel root- and shoot-specific genes.
    Plant J., 2004. 38(2): p. 366-79
    [PMID:15078338]
  3. Guan Y,Nothnagel EA
    Binding of arabinogalactan proteins by Yariv phenylglycoside triggers wound-like responses in Arabidopsis cell cultures.
    Plant Physiol., 2004. 135(3): p. 1346-66
    [PMID:15235117]
  4. McGrath KC, et al.
    Repressor- and activator-type ethylene response factors functioning in jasmonate signaling and disease resistance identified via a genome-wide screen of Arabidopsis transcription factor gene expression.
    Plant Physiol., 2005. 139(2): p. 949-59
    [PMID:16183832]
  5. Suzuki N, et al.
    Enhanced tolerance to environmental stress in transgenic plants expressing the transcriptional coactivator multiprotein bridging factor 1c.
    Plant Physiol., 2005. 139(3): p. 1313-22
    [PMID:16244138]
  6. Taki N, et al.
    12-oxo-phytodienoic acid triggers expression of a distinct set of genes and plays a role in wound-induced gene expression in Arabidopsis.
    Plant Physiol., 2005. 139(3): p. 1268-83
    [PMID:16258017]
  7. Nakano T,Suzuki K,Fujimura T,Shinshi H
    Genome-wide analysis of the ERF gene family in Arabidopsis and rice.
    Plant Physiol., 2006. 140(2): p. 411-32
    [PMID:16407444]
  8. Dombrecht B, et al.
    MYC2 differentially modulates diverse jasmonate-dependent functions in Arabidopsis.
    Plant Cell, 2007. 19(7): p. 2225-45
    [PMID:17616737]
  9. Nowak K,W
    ERF022 impacts the induction of somatic embryogenesis in Arabidopsis through the ethylene-related pathway.
    Planta, 2015. 241(4): p. 967-85
    [PMID:25534944]