PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT1G32510.1
Common NameANAC011, F5D14.30, NAC011
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family NAC
Protein Properties Length: 283aa    MW: 32871.8 Da    PI: 5.1094
Description NAC domain containing protein 11
Gene Model
Gene Model ID Type Source Coding Sequence
AT1G32510.1genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.33.7e-5061401128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                  lppGfrF Ptdeelv +yL+++ eg ++el e+i+ +d+yk++Pw+Lp k  + +++ ew+fF++rd+ky++g+r nratksgyWkatgkd++++++ 
  AT1G32510.1   6 LPPGFRFYPTDEELVGYYLHRRNEGLEIEL-EIIPLMDLYKFDPWELPeKsFLPNRDMEWFFFCHRDRKYQNGSRINRATKSGYWKATGKDRKIVCHs 102
                  79****************************.99**************95334556888*************************************986 PP

          NAM  96 .....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +++ +g++ktLvfy grap g +t+Wvmheyrl
  AT1G32510.1 103 sssssSSSITGCRKTLVFYMGRAPFGGRTEWVMHEYRL 140
                  666555555***************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.67E-574164IPR003441NAC domain
PROSITE profilePS5100555.3186164IPR003441NAC domain
PfamPF023651.8E-277140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MVGSFLPPGF RFYPTDEELV GYYLHRRNEG LEIELEIIPL MDLYKFDPWE LPEKSFLPNR  60
DMEWFFFCHR DRKYQNGSRI NRATKSGYWK ATGKDRKIVC HSSSSSSSSS ITGCRKTLVF  120
YMGRAPFGGR TEWVMHEYRL FDNDTSQGSL NFKGDFALCR VIKRNEHTLK KCEIISPEVS  180
DESLSNNVNN FCQASDLEKG SCDASNTRLS SPDFILESSF QGNSHSKTEE DSGFQVFTLP  240
EFEYPLEVFA DLNFDLEMED PFMFDYHPEP HMNNEVMSHH IRG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4dul_B5e-51617017171NAC domain-containing protein 19
4dul_A5e-51617017171NAC domain-containing protein 19
1ut7_B5e-51617017171NO APICAL MERISTEM PROTEIN
1ut7_A5e-51617017171NO APICAL MERISTEM PROTEIN
1ut4_B5e-51617017171NO APICAL MERISTEM PROTEIN
1ut4_A5e-51617017171NO APICAL MERISTEM PROTEIN
3swp_D6e-51617020174NAC domain-containing protein 19
3swp_C6e-51617020174NAC domain-containing protein 19
3swp_B6e-51617020174NAC domain-containing protein 19
3swp_A6e-51617020174NAC domain-containing protein 19
3swm_D6e-51617020174NAC domain-containing protein 19
3swm_C6e-51617020174NAC domain-containing protein 19
3swm_B6e-51617020174NAC domain-containing protein 19
3swm_A6e-51617020174NAC domain-containing protein 19
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasAT1G32510
AtGenExpressAT1G32510
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00175DAP27203113Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT1G32510.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT1G32510
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankF5D141e-170AC007767.3 Sequence of BAC F5D14 from Arabidopsis thaliana chromosome 1, complete sequence.
GenBankCP0026841e-170CP002684.1 Arabidopsis thaliana chromosome 1 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_174529.20.0NAC domain containing protein 11
SwissprotQ9FFI51e-62NAC86_ARATH; NAC domain-containing protein 86
TrEMBLQ9LQK50.0Q9LQK5_ARATH; F5D14.30 protein
STRINGAT1G32510.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1715800
MalvidsOGEM150291719
Publications ? help Back to Top
  1. Riechmann JL, et al.
    Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
    Science, 2000. 290(5499): p. 2105-10
    [PMID:11118137]
  2. Ooka H, et al.
    Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana.
    DNA Res., 2003. 10(6): p. 239-47
    [PMID:15029955]