PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT32369
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 253aa    MW: 27759.2 Da    PI: 6.3698
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT32369genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.31.1e-0979123250
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50 
               +++GV+  ++ grWvA  r       + r ++g+f ++ eA++a++ + 
  EMT32369  79 KFRGVY-ERQPGRWVADFRSH---RLNIRRWIGTFPSEAEAKAAYDDFV 123
               89***8.777*******5553...245999*******99*******986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.8E-1178125IPR001471AP2/ERF domain
SMARTSM003800.001279133IPR001471AP2/ERF domain
PfamPF008472.1E-679122IPR001471AP2/ERF domain
PROSITE profilePS5103212.879141IPR001471AP2/ERF domain
SuperFamilySSF541712.94E-979125IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MQGEGAGRWR RGPPCAAEEA TPEGEEEEER LAARCMANKI TAVYTFDTLT ILQARHLSGR  60
RRRVPRMRGA KVAKPPSRKF RGVYERQPGR WVADFRSHRL NIRRWIGTFP SEAEAKAAYD  120
DFVTRFSLSG YVHVAIVTAS PADLSRNGHK IDLVSDESNQ SEMRLKQDAG AEAAPCMPSL  180
TSPASPPLPA AVMPHEALPY ADERQMGEPF VAEDLASNDL IAAADLANLP LPSLDDKLDF  240
SSGDWSLASS GLQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020146760.10.0ethylene-responsive transcription factor CRF2-like
TrEMBLM8CDA80.0M8CDA8_AEGTA; Ethylene-responsive transcription factor ERF057
STRINGEMT323690.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP140032023
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11020.12e-08DRE/CRT-binding protein 2B