PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT32258
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 186aa    MW: 21428.4 Da    PI: 8.75
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT32258genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.52.5e-11144184350
       AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50 
                +GV++  k+ +W A I++      +k+++lg+ gt +eAa++++++ 
  EMT32258 144 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQDEAARLYDRYY 184
               79**98..47*********4.....5*******************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510328.702119186IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-6143184IPR016177DNA-binding domain
PfamPF008473.9E-5143183IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.3E-4146182IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MTQYFCSKVG LTLNPLDSVF GNIWEGKWEF RGGSCAEIRH GMSYFIPNPP LFITLDFVAG  60
KDSLPVDLPK PVENEKHGEV EHANVNPLSV HPLPLTRTSD VLPESSNGSD SLKEEKNQYY  120
PGKEIKRRKR HRRKQYVDQE PCIMRGVYFK NMKWQAAIKV DKKQIHLGTV GTQDEAARLY  180
DRYYLD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2501020.0AK250102.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf64c22, mRNA sequence.
GenBankAK3645620.0AK364562.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2026I07.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020197934.18e-78ethylene-responsive transcription factor-like protein At4g13040
TrEMBLM8CDM81e-138M8CDM8_AEGTA; Ethylene-responsive transcription factor-like protein
STRINGEMT322581e-139(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75163545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.24e-23ERF family protein